Query= MSMg01no409_i03.b1 MSMg01no409_i03.b1 CHROMAT_FILE:
MSMg01no409_i03.b1 PHD_FILE: MSMg01no409_i03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:53 2005
(447 letters)
>mm_chr16_89128583_89129429
Length = 847
Score = 658 bits (340), Expect = 0.0
Identities = 384/406 (94%), Gaps = 13/406 (3%)
Strand = Plus / Minus
Query: 5 gaattcaaggactttatcaattatttatttcatgtatgtattatttttgaatctccagaa 64
|||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 393 gaattcaaggacttcataaattatttatttcatgtatgtattatttttgaatcttcagaa 334
Query: 65 aaatcaatgaccattttatgatcacaaactctatatgtcgttcaatgcttttgtttgtca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aaatcaatgaccattttatgatcacaaactctatatgtcgttcaatgcttttgtttgtca 274
Query: 125 tctcacaatgtaagtggtaaggatgtatctgtgaaagaaattatggcttaattgcctgct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tctcacaatgtaagtggtaaggatgtatctgtgaaagaaattatggcttaattgcctgct 214
Query: 185 ccatcctacatttttattctttttttttaaaaaaatatttatttatttatttgttggttt 244
||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 213 ccatcctacatttttattctttttttt-----aaatatttatttatttatttatt----- 164
Query: 245 gtttatttatttatttaatgtatattgagtacacagtatttgtcttcagacacacaccaa 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 163 ---tatttatttatttaatgtatattgagtacacagtagctgtcttcagacacacaccaa 107
Query: 305 aagagggcattggatcccattacagatggttgtgagccacaatgtggttgctgggaattg 364
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 106 aagagggcattggatcccattacagatggttgtgagctacaatgtggttgctgggaattg 47
Query: 365 aacccaggacctatggaacagcagtcagcacttttaaccgctaagc 410
|||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 46 aacccaagacctatggaacagcagtcagtacttttaaccgctaagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_i03.g1 MSMg01no409_i03.g1 CHROMAT_FILE:
MSMg01no409_i03.g1 PHD_FILE: MSMg01no409_i03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:54 2005
(449 letters)
>mm_chr16_88911360_88912208
Length = 849
Score = 801 bits (414), Expect = 0.0
Identities = 441/450 (98%), Gaps = 2/450 (0%)
Strand = Plus / Plus
Query: 1 atactttttggtctgttgtggattccctatctgggaggagtacatatgtgtatagtatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atactttttggtctgttgtggattccctatctgggaggagtacatatgtgtatagtatct 260
Query: 61 ctccagtcaaagttctgttataaaacatttgtccaatgtaatttttaatttcttataagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctccagtcaaagttctgttataaaacatttgtccaatgtaatttttaatttcttataagc 320
Query: 121 atgaatgtgagttcttttaaaggttttctgggtgcaagtaaatatggataaaacaaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaatgtgagttcttttaaaggttttctgggtgcaagtaaatatggataaaacaaataa 380
Query: 181 ttttagtgtatcaatcatcatcatgaacaacagcaagtattgtttgaaactcacaaattc 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttagtgtatcaatcatcatcatggacaacagcaagtattgtttgaaactcacaaattc 440
Query: 241 cataatgatttcttgtatttttatttgtgacaatagttaacagtcatgaacacatcaggg 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cataatgatttcttgcatttttatttgtgacaatagttaacagtcatgaacacatcaggg 500
Query: 301 gaagttgaaattagattataacacacagtgttatactgtagtaataattccaaaagttta 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taagttgaaattagattataacacacagtgttatactgtagtaataattccaaaagttta 560
Query: 361 attaagtcagttattttaacatatctggctaagtct-agtgggttaggacattactcagg 419
||||| ||||||||||||||||||||| |||| | | |||||||||||||||||||||||
Sbjct: 561 attaactcagttattttaacatatctgcctaatt-tcagtgggttaggacattactcagg 619
Query: 420 tcataaccatcttatagagaaaattattta 449
|||||||||||||| |||||||||||||||
Sbjct: 620 tcataaccatcttagagagaaaattattta 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
