NNNATTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGGTGAGGTAGAAGGATTCACTATGAAATGGTTTTCATAG
TAGTTGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATCAC
GGAGAAAGGAGCTTCAGTTGAGGAAATGCCTACATGAGATCCAGCTGTAA
GGCATTTTCTCAATTAGTGATTGTCTTAGTCAGGGTTTCTATTCGTGGAC
AAAACATCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGCT
TATACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCA
AGCAGGTCAGAGAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTT
TACTGGCTTGCTTCCTCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCAA
GACTACCAGTCCAGAGATGGTCCCACCCACAAGGGACCTTTCCCCCTTGA
TCACTAATTGAGAAAATGCCTGACAGTTGTATCTCATGGAGGCATTTCTT
AAATTTTCAATCTCTTTAAAAATCCATCTCTTAAATTTTTCATCTCCTTT
AAAAAACCATCTCTTTTTAAAATCCCAAGCCTTTTACAATTAAAAAGCTC
CTTAATGGGGGGGCCCCCCAAAAAAGTTTCTTCCTTCATGAAGGGAACAA
TACGGGGCCACTTCCCCTCCTAAGTAAAAATTATCCCCCCCGGTCCTAGG
GTGGGAAACCACCCTAAAACTCCGTGGTT

CCGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACACACTTGTAGTTTTGTAAGGTGA
CATCTTCAGATGGTGGAAGTCATAAAATTGTTATGAGAATCTACAGCCAA
TGAGAACTGGGGGATAGAACAGAAAGTTTATGTACCTATTATTCTGGATT
CAAAGAGCACAAGGAGTAAAGAAAACAAAACAAAACAAAACAAAACAAAA
CAAAACAAAACAAAACTCTGATGACTTCCACTTATCTGGAACTTTAATCC
TGACAACACAAAACTTGAATTACTTTATGATTGATACTATATTTATGCTG
GAAATTTTTTATGCATATTTGCATATACATATATACACATTTACATAGAC
AATGTGTTATCATTTTAGTTCAAGTTGTTTTAATATCCAAGTCATTTACT
TTTTGCATAAAGGTTGTTTAAGATGCACAGTTTGAAGATTTTTTTTTTTT
GTCTTGAAAGGCTGAAAGGACCCAGATATAGCTGTCTCTTGTGAGACTAT
GCCAGGGCCTAGCAAACACATAAGTGGATGCTCACAGTCAGCTATTGGAT
GGATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTATCCCAGGAGCTA
AAGAGATCTGCCAACTGTTCGTGCTACAACATTATGAACTAACTCTTACC
CGGAAGTTCTTGATCCTATCTGCATATGTATTCAAAGAAGGGCTTATTCG
TCCCTCCACGGAN

Query= MSMg01no409_n17.g1 MSMg01no409_n17.g1 CHROMAT_FILE:
MSMg01no409_n17.g1 PHD_FILE: MSMg01no409_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:22 2005
         (490 letters)



>mm_chr16_85955310_85956199
          Length = 890

 Score =  679 bits (351), Expect = 0.0
 Identities = 403/431 (93%), Gaps = 18/431 (4%)
 Strand = Plus / Minus

                                                                       
Query: 5   acttgtagttttgtaaggtgacatcttcagatggtggaagtcataaaattgttatgagaa 64
           ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 794 acttgtagttttgtaaggtgatatcttcagatggtggaagtcatacaattgttatgagaa 735

                                                                       
Query: 65  tctacagccaatgagaactgggggatagaacagaaagtttatgtacctattattctggat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tctacagccaatgagaactgggggatagaacagaaagtttatgtacctattattctggat 675

                                                                       
Query: 125 tcaaagagcacaaggagtaaagaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaa 184
           ||||||||||||||||||||||               |||||||||||||||||||||||
Sbjct: 674 tcaaagagcacaaggagtaaag---------------aaaacaaaacaaaacaaaacaaa 630

                                                                       
Query: 185 acaaaactctgatgacttccacttatctggaactttaatcctgacaacacaaaacttgaa 244
           ||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||
Sbjct: 629 acaaaactctgatgacttccaattatctggaactgtaatcctgacaatacaaaacttgaa 570

                                                                       
Query: 245 ttactttatgattgatactatatttatgctggaaattttttatgcatatttgcatataca 304
           |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 569 ttactttaggattgatactatatttatgctggaaattttgtatgcatatttgcatatgca 510

                                                                       
Query: 305 tatatacacatttacatagacaatgtgttatcattttagttcaagttgttttaatatcca 364
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tatatacatatttacatagacaatgtgttatcattttagttcaagttgttttaatatcca 450

                                                                       
Query: 365 agtcatttactttttgcataaaggttgtttaagatgcacagtttgaagattttttttttt 424
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  
Sbjct: 449 agtcatttactttttgcataaaggttgtttaagatgcatagtttgaagattttttttt-- 392

                      
Query: 425 tgtcttgaaag 435
            ||||||||||
Sbjct: 391 -gtcttgaaag 382


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space:   422400
Effective search space used:   422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)