Query= MSMg01no410_d24.b1 MSMg01no410_d24.b1 CHROMAT_FILE:
MSMg01no410_d24.b1 PHD_FILE: MSMg01no410_d24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:56 2005
(440 letters)
>mm_chr16_93560770_93561609
Length = 840
Score = 754 bits (390), Expect = 0.0
Identities = 426/438 (97%), Gaps = 1/438 (0%)
Strand = Plus / Plus
Query: 1 attcctgaggaaattccctgtcgcttgcttcacagtttccccagctggactcagcttaaa 60
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcctgaggaaactgcctgtcgcttgcttcacagtttccccagctggactcagcttaaa 260
Query: 61 cccatcttatacctgactctaggtgcctatctttgtttcttacaacatttccatctcagt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accatcttatacctgactctaggtgcctatctttgtttcttacaacatttccatctcagt 320
Query: 121 cacttcaaaatacataaatgtatgtctggtatattggtatacaagtctgtaatcaagcac 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 cacttcaaaatacataaatgtatgcctggtatattggtatacaagtctgtaatcaagcac 380
Query: 181 tggggaggcagaggcacgaggaacatgagtttaaggccagcctgggctacatagcaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggggaggcagaggcacgaggaacatgagtttaaggccagcctgggctacatagcaaaaa 440
Query: 241 cttacttcaataaatgaaaaaaatgattatatgaaatgtataat-ttttttaaatctctt 299
|||||||||||||||||||||||| ||||||| |||||||||| |||||||| ||||||
Sbjct: 441 cttacttcaataaatgaaaaaaattattatataaaatgtataaaattttttaagtctctt 500
Query: 300 tctagtttgacaactcacagatgtctttctgaaggacctaggagccatccctttgacata 359
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctagtttgacaactcacaaatgtctttctgaaggacctaggagccatccctttgacata 560
Query: 360 gagtcattaagaccacgccgcctctccaagtgtctctttgaaagtagcagcctgtttgga 419
|| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaatcattaagaccacgctgcctctccaagtgtctctttgaaagtagcagcctgtttgga 620
Query: 420 caggcatcagaaagccta 437
||||||||||||||||||
Sbjct: 621 caggcatcagaaagccta 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_d24.g1 MSMg01no410_d24.g1 CHROMAT_FILE:
MSMg01no410_d24.g1 PHD_FILE: MSMg01no410_d24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:56 2005
(409 letters)
>mm_chr16_93782424_93783229
Length = 806
Score = 737 bits (381), Expect = 0.0
Identities = 398/405 (98%), Gaps = 3/405 (0%)
Strand = Plus / Minus
Query: 5 tgtggcttggaactcatagcaatccccctgcctcagcaccctggttttagtattctggtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tgtggcttggaactcatagcaatccccctgcctcagcaccctggttttagtattctggtc 646
Query: 65 ctcaatgctgggattatatgcatgggccactacatctaggtaagttttactgtttgaatt 124
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 645 ctcaatgctgggattatacgcatgggccactacatctgggtaagttttactgtttgaatt 586
Query: 125 tttgaattttcttatgaacacgctttgcttttatactggggcaaagagaaagttttaagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tttgaattttcttatgaacacgctttgcttttatactggggcaaagagaaagttttaagg 526
Query: 185 aaagcttcctgggaggagaaagattcgtgctttagagatatcaatgcccagctcacaata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 aaagcttcctgggaggagaaagattcgtgctttagagatatcaatgcccagctcacaata 466
Query: 245 gaccctgcccaagactgcttgatcttccttcctgagtggaagaggcttacaacccaggca 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 465 gaccctgcccaagactgcttgatcttccttcctgagtggaagaggcttagaacccaggca 406
Query: 305 aagctaagatgcagttctgggtaagggttattagcaacagtggcattcttacagactaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aagctaagatgcagttctgggtaagggttattagcaacagtggcattcttacagactaca 346
Query: 365 ggatgacagactactggacagtctttcccaacagtctcatataca 409
||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 345 ggatgacagactactggac---cttccccaacagtctcatataca 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 806
Length adjustment: 9
Effective length of query: 400
Effective length of database: 797
Effective search space: 318800
Effective search space used: 318800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
