Query= MSMg01no413_e21.b1 MSMg01no413_e21.b1 CHROMAT_FILE:
MSMg01no413_e21.b1 PHD_FILE: MSMg01no413_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:57 2005
(527 letters)
>mm_chr16_94842695_94843617
Length = 923
Score = 980 bits (507), Expect = 0.0
Identities = 521/527 (98%), Gaps = 4/527 (0%)
Strand = Plus / Plus
Query: 1 caggcttccattctctgctgtagagaggaacaggatggggagtttgttcagagagaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggcttccattctctgctgtagagaggaacaggatggggagtttgttcagagagaagaa 260
Query: 61 ataaagtcttgactgccatgtagttattgacaaggagtaaaagagtgtcacttcaattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaagtcttgactgccatgtagttattgacaaggagtaaaagagtgtcacttcaattta 320
Query: 121 gatgcaggtggggcaggtttttattgtttttctgtggggaattcttaggccatatgtgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgcaggtggggcaggtttttattgtttttctgtggggaattcttaggccatatgtgtc 380
Query: 181 cctcagacacataagaaacaaaagaaatagacaggattcggtgtaggaatagtaaaacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcagacacataagaaacaaaagaaatagacaggattcggtgtaggaatagtaaaacca 440
Query: 241 tgcagtgatagccatggaaaccagagtgcgaaagttgacactgacagaataatgtaacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcagtgatagccatggaaaccagagtgcgaaagttgacactgacagaataatgtaacag 500
Query: 301 tgacccaggctcagcagtgcacagtccctgagagcaccacctagggagggagggccctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgacccaggctcagcagtgcacagtccctgagagcaccacctagggagggagggccctgt 560
Query: 361 attaattagtggtttttatggcccctcccagtaggccctgtgctacctattcacatatgg 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attaattaatggtttttatggcccctcccagtaggccctgtgctacctattcacatatgg 620
Query: 421 ggctagcagtttcttaaatttcttccccccccccaatagccccacaaaagacactcttta 480
||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||
Sbjct: 621 ggctagcagtttcttaaatttct---cccccccca-tagccccacaaaagatactcttta 676
Query: 481 atcaccatccccccagttccatcctaccaaatagtatccttgtctga 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 atcaccatccccccagttccatcctaccaaatagtatccttgtctga 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 923
Length adjustment: 10
Effective length of query: 517
Effective length of database: 913
Effective search space: 472021
Effective search space used: 472021
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_e21.g1 MSMg01no413_e21.g1 CHROMAT_FILE:
MSMg01no413_e21.g1 PHD_FILE: MSMg01no413_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:57 2005
(216 letters)
>mm_chr16_95012368_95012983
Length = 616
Score = 373 bits (193), Expect = e-108
Identities = 208/213 (97%)
Strand = Plus / Minus
Query: 1 tcttgaacattttcttgacactctccttccccaagttagccaattccttctcgttggtcc 60
|||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||
Sbjct: 384 tcttgaacattttcttgacactctccttcctcaagttagtcaattccttctctttggtcc 325
Query: 61 cctagaactttgtatgcaacaatcaagttactcttaataatctgtgctcattctattgtc 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 324 cctagaactttgtatgcaacaatcaaattactcttaataatctgtgctcattctattgtc 265
Query: 121 caccaaggagatatgtctgggtaatatttctgtgggctgaaagcagccattataggtgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caccaaggagatatgtctgggtaatatttctgtgggctgaaagcagccattataggtgtt 205
Query: 181 tgctgatggatgggtggatggatggatggatgg 213
||||||| |||||||||||||||||||||||||
Sbjct: 204 tgctgatagatgggtggatggatggatggatgg 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 216
Length of database: 616
Length adjustment: 9
Effective length of query: 207
Effective length of database: 607
Effective search space: 125649
Effective search space used: 125649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
