Query= MSMg01no414_i03.b1 MSMg01no414_i03.b1 CHROMAT_FILE:
MSMg01no414_i03.b1 PHD_FILE: MSMg01no414_i03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:34 2005
(649 letters)
>mm_chr16_72125423_72126473
Length = 1051
Score = 1174 bits (607), Expect = 0.0
Identities = 637/647 (98%), Gaps = 4/647 (0%)
Strand = Plus / Minus
Query: 5 gaattccctagggttctctggctagccagtcaagcaaaatgaacaaatcagg-ttttaaa 63
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 850 gaattccctagggttctctggctagccagtcaagcaaaatgaacaaatcaggtttttaaa 791
Query: 64 aaagcccaccttgtcttgatcaaaatataatagttactcctaagggacgacaccaaaagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 aaagcccaccttgtcttgatcaaaatataatagttactcctaagggacgacaccaaaagt 731
Query: 124 tgacatctggctgtcccatttatgtgcacccatagggttgcatacccacaaaaataagtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tgacatctggctgtcccatttatgtgcacccatagggttgcatacccacaaaaataagtg 671
Query: 184 cagctgaacacaggtagacatgtgtgtatgtagtatgagttag-aaaaaagacttgttat 242
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 670 cagctgaacacaggtagacatgtgtgtatgtagtatgagttagaaaaaaaaacttgttat 611
Query: 243 ataaat-ccgagtaaatgaaataagacatgttaacgtgtaataatcaacttcagaacaag 301
|||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 610 ataaatgccgagtaaatgaaataag-catgttaacgtgtaaaaatcaacttcagaacaag 552
Query: 302 caacatttacggacagaaagataaactttataatagatgaattaaataattcagaaacga 361
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 caacatttatggacagaaagataaactttataatagatgaattaaataattcagaaacga 492
Query: 362 gttgaatatctaaaaatgcacaagaaaatcttccggggaaatataaaataatgaaagaga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gttgaatatctaaaaatgcacaagaaaatcttccggggaaatataaaataatgaaagaga 432
Query: 422 ccacaataagagattagaactacttctccataactactaagaaaatacagtatcattatg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ccacaataagagattagaactacttctccataactactaagaaaatacagtatcattatg 372
Query: 482 agtacacatgacttgaacaacattactaaatgcctgactaacacaatcataacaaagaac 541
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agtacacatgacttgaactacattactaaatgcctgactaacacaatcataacaaagaac 312
Query: 542 taaattaatcaatcattggttcttccaattatatattaatctttcactgaaatatatgtt 601
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 taacttaatcaatcattggttcttccaattatatattaatctttcactgaaatatatgtt 252
Query: 602 ctagaatagaaaaaataccttaaatagaaaagagtagaggagtttaa 648
||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 251 ctagaatagaaaaaataccttaaatagaaaagagtagaggaatttaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1051
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1041
Effective search space: 665199
Effective search space used: 665199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_i03.g1 MSMg01no414_i03.g1 CHROMAT_FILE:
MSMg01no414_i03.g1 PHD_FILE: MSMg01no414_i03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:34 2005
(251 letters)
>mm_chr16_71996184_71996835
Length = 652
Score = 466 bits (241), Expect = e-136
Identities = 250/253 (98%), Gaps = 2/253 (0%)
Strand = Plus / Plus
Query: 1 acttgaaaaatacctatttccacaattacaaaaaattaacaagatataaaataacactta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttgaaaaatacctatttccacaattacaaaaaattaacaagatataaaataacactta 260
Query: 61 gataaggtcaaactacaaggaaattaacaaaagaaaggacacatgcacccagtctcttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gataaggtcaaactacaaggaaattaacaaaagaaaggacacatgcacccagtctcttaa 320
Query: 121 gaggaaaatcattgattgctttgaata-ttttttttttggaagaaagacagcattttctt 179
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 321 gaggaaaatcattgattgctttgaataattttttttttggtagaaagacagcattttctt 380
Query: 180 ttttttttt-attattaggtattttcctcatttacattttcaatgctatcccaaaggtcc 238
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttttttttattattaggtattttcctcatttacattttcaatgctatcccaaaggtcc 440
Query: 239 cccatacccaccc 251
|||||||||||||
Sbjct: 441 cccatacccaccc 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 652
Length adjustment: 9
Effective length of query: 242
Effective length of database: 643
Effective search space: 155606
Effective search space used: 155606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
