Query= MSMg01no415_l11.b1 MSMg01no415_l11.b1 CHROMAT_FILE:
MSMg01no415_l11.b1 PHD_FILE: MSMg01no415_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:10 2005
(270 letters)
>mm_chr16_76216846_76217515
Length = 670
Score = 484 bits (250), Expect = e-141
Identities = 262/266 (98%)
Strand = Plus / Minus
Query: 5 gaattctgccattgccggagctgctggatcttatcagagccactgggccaatctctgctg 64
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gaattctgccagtggtggagctgctggatcttatcagagccactgggccaatctctgctg 411
Query: 65 agggaagaaaatcgtatttttgttcagtgatggctgaataagaagaaaataatcggaata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 agggaagaaaatcgtatttttgttcagtgatggctgaataagaagaaaataatcggaata 351
Query: 125 aatattcagttatattccatttaaagggatgtaaaaaatggagaggatggagaccttgcc 184
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aatatccagttatattccatttaaagggatgtaaaaaatggagaggatggagaccttgcc 291
Query: 185 cttaaactccgtgcttggaaggaaaactatatacatttgtatttacttttcatattcagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cttaaactccgtgcttggaaggaaaactatatacatttgtatttacttttcatattcagg 231
Query: 245 gttgggaatttgaagcgcgtttcagg 270
||||||||||||||||||||||||||
Sbjct: 230 gttgggaatttgaagcgcgtttcagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no415_l11.g1 MSMg01no415_l11.g1 CHROMAT_FILE:
MSMg01no415_l11.g1 PHD_FILE: MSMg01no415_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:10 2005
(271 letters)
>mm_chr16_76009814_76010483
Length = 670
Score = 455 bits (235), Expect = e-132
Identities = 262/271 (96%), Gaps = 1/271 (0%)
Strand = Plus / Plus
Query: 1 aaagcatttctgaccatgtttttcccccttgaattacttttaaaataaaaagtaaaactc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 aaagcatttctgaccatgtttttcccccttgaattactttcaaaataaaaagtaaaactc 260
Query: 61 taggaggaaaaaaaaaacattattcagagattcggagaggaaactaagaaatctttaaac 120
||||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 261 taggagg-aaaagaaaacattattcagagattcagagagaaaactaagaaatctttaaac 319
Query: 121 cgctaactaggcaaacaagaaataaaatctgtagattttaaattctattatttaaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cgctaactaggcaaacaagaaataaaatctgtagattttaaattctattatttaaaaaaa 379
Query: 181 aatctctttattttatccaagctacgaagttagttccattgggaatgtaataattgccag 240
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 380 aatctctttattttatccaagctatgaagttagtttcattgggaatgtaataattgccag 439
Query: 241 taccaatatgataaggactggctatcactca 271
|||||||||||||| |||||| |||||||||
Sbjct: 440 taccaatatgataaagactggttatcactca 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 670
Length adjustment: 9
Effective length of query: 262
Effective length of database: 661
Effective search space: 173182
Effective search space used: 173182
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
