Query= MSMg01no417_g10.b1 MSMg01no417_g10.b1 CHROMAT_FILE:
MSMg01no417_g10.b1 PHD_FILE: MSMg01no417_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:16 2005
(214 letters)
>mm_chr16_34161498_34162111
Length = 614
Score = 379 bits (196), Expect = e-110
Identities = 208/212 (98%)
Strand = Plus / Minus
Query: 1 caccatgtcacctctcttcctctagtgacaacagcaaatctttgtcccattcatgaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 caccatgtcacctctcttcctctagtgacaacagcaaatctttgtcccattcatgaaatt 353
Query: 61 ttccttgacaactccccaaaagaaatgttcgcaggatatgtgctctgacattgaacttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttccttgacaactccccaaaagaaatgttcgcaggatatgtgctctgacattgaacttta 293
Query: 121 aagcaaaccagctgcaagtcccagtctgtaaatgtgctgtctggagaacaggttgctggc 180
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aagcaaaccagctggaagtcccagtctgtaaatgtgctgtctggagaacaggttgctggg 233
Query: 181 aaattcacaatacactaccatgatatggtctg 212
|||||||||| |||||||||||| ||||||||
Sbjct: 232 aaattcacaacacactaccatgagatggtctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no417_g10.g1 MSMg01no417_g10.g1 CHROMAT_FILE:
MSMg01no417_g10.g1 PHD_FILE: MSMg01no417_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:16 2005
(522 letters)
>mm_chr16_33938006_33938927
Length = 922
Score = 971 bits (502), Expect = 0.0
Identities = 519/528 (98%), Gaps = 6/528 (1%)
Strand = Plus / Plus
Query: 1 actgctgagccccactgtgatgacttccaaagtcctgctctccagtcttgaactcacctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 actgctgagccccactgtgatgacttccaaagtcctgctctccagtcttgaactcacctg 254
Query: 61 tgggtggacactcagtacattcaatctcctgcttttcttgatgatgtcagccttagcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgggtggacactcagtacattcaatctcctgcttttcttgatgatgtcagccttagcaac 314
Query: 121 aggcaccaaggaggaagagacgctgctaaaacagtcagcctttaaaatgagccacttaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aggcaccaaggaggaagagacgctgctaaaacagtcagcctttaaaatgagccacttaga 374
Query: 181 gagagagtgagag------agagacagagacagagacagagtgttcagtggttaacaaca 234
||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gagagagtgagagagagacagagacagagacagagacagagtgttcagtggttaacaaca 434
Query: 235 cttgctgttattgctgaacaaactccaattcccagcacgcatgtcaggaggcttacaaca 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cttgctgttattgctgaacaaactccaattcccagcacgcatgtcaggaggcttacaaca 494
Query: 295 gcctgccaagtccatctctgagggctgtgataccctctcttctggaccagtggacacacg 354
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 495 gcctgccaagtccatctctgagggctgtgacaccctctcttctggaccagtggacacacg 554
Query: 355 tacatgtagctacccagagagacacacaaatgaaagtgagccttaggaagagtgagccat 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tacatgtagctacccagagagacacacaaatgaaagtgagccttaggaagagtgagccat 614
Query: 415 ttatagcacttcaaaattgagatccccagaggacccagtatccatgcttttcaggacact 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttatagcacttcaaaattgagatccccagaggacccagtatccatgcttttcaggacact 674
Query: 475 cacgttagttatgcccagctccaggtagtgataatgacactacccttg 522
||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 675 cacgttagttatgcccagctccaggcagtgatgatgacactacccttg 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
