NNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAATCACTACACAACGGAGGAAGCACTTGGTGAGTTCAAGTCA
GTGTACACTCGCAAAGGCACAGAGATAGTGAAAGTGTAGAGATCTGAGAA
GAACGCAGGAAACCGAATGTGTAGGGTTGGTATTAGAGAGGTGGATAAGC
TGCATTCAGGATGAGGTACTTGGATGGGTTTCTGCATTAAAATGGCTTGC
GATGGGACTTGAAGTAGAGAACAGGTCTACTCAAAAGGATGATTCTGTCT
CTAAGTAGAAGATTGACATGAGAGTCTGTACCAGGCAAAGTAATTAGAAA
AATATTCTCTTTAAAAACATGCTTTACAATAAGAACTATAAGTATTGCCG
TCTAGAGGATTCCATGACTCATTGAATGGAGGTAGAGAAAAACAAAGAAA
CTTTTGGGATGTTTCAGGCCTGGGCACGTGGGCAAGTGGTGGCCCTATAT
AGCAGAATAGGAATTACCGGAAGAGGTGCATATTGTGAGGAGAGAATTCA
GGGGGAAGAGAAGATGCTCATTTTGGGAGAATGAATCATGAATATGGAGA
ACTGCATTTGAAGTANGATTCCAATAATGTCTGGGCTGACAATAGAAGTT
TGCGAGTCCCACACTAAACTGTGGTGGTGGCAGGATCTGTGGGCAAGGCC
ATTGCCCAACCAAGTGTGGGCTTATAGCGTTTCCTGTTCCAAAATATAAG
CACTTTT

NCCGATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTTATCAGATAGGAGTTGTGA
GAACTCTTCAAAGTCCTAGCTCACCAGTGATGTGTTAATTTTATAAGCCA
GTTTAAGGAGGAGAGCACCAATCCTGCTATGCTAAGATTTGTGTTTCTAC
ATGCTTTCTGGTGTGAAAGATACTTATGCCCTTTAAAATGTAGCTTTTTT
TTAATTGCTTTGCCTCCTCTTGATACCTGCTCTCTTCCAGTTTTTCTCAG
ACAGATAGAGTCAGGATAGTCTTACTAGTCCGGCAGATTTGTATTTAATT
AGAAGGCAATGGGTATGTTCTTGAAAACACTAAAGAAAAAAAAAGATGCT
CCAGGGTGGATTAAACTAGCAATATTAAATAAAATGGATTGCTATTGGGA
GGAGATGCAGAGATTAGGGAAATGGACCTCACTTAGCAGGCCATTATAAA
TTATAAAAATGTGTGTGTCTTTCCAGTTGCCCACACAGAGAACTTGGGGT
TCAGGAAAGCTGAACAAAGACCACTAAAATCTAACCTAGCCTTGGAATTC
CTTCTTTGGGAAATATTGAAAAAAATAATTTTCCCAACTATACTTGGTTT
TCTATATCACCCCTCATCTGGGTAAATAATATAAATAACCTCTGAAGAAT
AAAGGTACCTTTATTAGGACCCCCTCCTGGCCCCAAGTTTATTGTCTTAA
GCTTTTTTTGAG

Query= MSMg01no417_j14.b1 MSMg01no417_j14.b1 CHROMAT_FILE:
MSMg01no417_j14.b1 PHD_FILE: MSMg01no417_j14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:31 2005
         (566 letters)



>mm_chr16_42358186_42359151
          Length = 966

 Score =  994 bits (514), Expect = 0.0
 Identities = 550/562 (97%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaatcactacacaacggaggaagcacttggtgagttcaagtcagtgtacactcgc 64
           |||||||||||||| |||| |||||||||| |||||||||||||||||| |||||||| |
Sbjct: 766 gaattcaatcactaaacaatggaggaagcatttggtgagttcaagtcagcgtacactcac 707

                                                                       
Query: 65  aaaggcacagagatagtgaaagtgtagagatctgagaagaacgcaggaaaccgaatgtgt 124
           ||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||| |
Sbjct: 706 aaaggcacagagatagtgaaagtgtagagatctgagaagaatgcaggaaagtgaatgtat 647

                                                                       
Query: 125 agggttggtattagagaggtggataagctgcattcaggatgaggtacttggatgggtttc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 agggttggtattagagaggtggataagctgcattcaggatgaggtacttggatgggtttc 587

                                                                       
Query: 185 tgcattaaaatggcttgcgatgggacttgaagtagagaacaggtctactcaaaaggatga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tgcattaaaatggcttgcgatgggacttgaagtagagaacaggtctactcaaaaggatga 527

                                                                       
Query: 245 ttctgtctctaagtagaagattgacatgagagtctgtaccaggcaaagtaattagaaaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttctgtctctaagtagaagattgacatgagagtctgtaccaggcaaagtaattagaaaaa 467

                                                                       
Query: 305 tattctctttaaaaacatgctttacaataagaactataagtattgccgtctagaggattc 364
           ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 466 tattctctttaaaaacatgttttacaataagaactataagtattgccgtctataggattc 407

                                                                       
Query: 365 catgactcattgaatggaggtagagaaaaacaaagaaacttttgggatgtttcaggcctg 424
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 406 catgactcattgaatggaggtagagaaaaacaaagagacttttgggatgtttcaggcctg 347

                                                                       
Query: 425 ggcacgtgggcaagtggtggccctatatagcagaataggaattaccggaagaggtgcata 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggcacgtgggcaagtggtggccctatatagcagaataggaattaccggaagaggtgcata 287

                                                                       
Query: 485 ttgtgaggagagaattcagggggaagagaagatgctcattttgggagaatgaatcatgaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttgtgaggagagaattcagggggaagagaagatgctcattttgggagaatgaatcatgaa 227

                                 
Query: 545 tatggagaactgcatttgaagt 566
           ||||||||||||||||||||||
Sbjct: 226 tatggagaactgcatttgaagt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space:   531536
Effective search space used:   531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)