Query= MSMg01no417_l19.b1 MSMg01no417_l19.b1 CHROMAT_FILE:
MSMg01no417_l19.b1 PHD_FILE: MSMg01no417_l19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:42 2005
(617 letters)
>mm_chr16_64442433_64443449
Length = 1017
Score = 1125 bits (582), Expect = 0.0
Identities = 606/614 (98%), Gaps = 2/614 (0%)
Strand = Plus / Plus
Query: 5 gaattcctcacaactacatggtggctcacaaccatctgaaatgggatccgatgcctcttc 64
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 205 gaattcctcacaaccacatggtggctcacaaccatctgaaatgggatctgatgcctcttc 264
Query: 65 tggtgtgtctgaagacagtgacagtgtacacacatacatgaaataagtaagtaagtaaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggtgtgtctgaagacagtgacagtgtacacacatacatgaaataagtaagtaagtaaat 324
Query: 125 aaataaataaataaataaataaatcttttttaaaagatacaaatacctattgacttgata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaataaataaataaataaataaatcttttttaaaagatacaaatacctattgacttgata 384
Query: 185 attaaagcaaaagaaacataaattccccccaaaacagttaattttgtctgcaatttcatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attaaagcaaaagaaacataaattccccccaaaacagttaattttgtctgcaatttcatg 444
Query: 245 ggttactcattaaatttgggcaatacataaaattacacatggtggctttctaatatccat 304
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggttagtcattaaatttgggcaatacataaaattacacatggtggctttctaatatccat 504
Query: 305 agcctttgggtaggtgaatggaagattctatagaaatcacacaagaaactcacaactttt 364
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agcctttgggtaggtgaatgaaagattctatagaaatcacacaagaaactcacaactttt 564
Query: 365 cttagttgttgttcttgttgtggttctcctcctgctcctcctactcctcctttgtctaat 424
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttagctgttgttcttgttgtggttctcctcctgctcctcctactcctcctttgtctaat 624
Query: 425 agtaaaatactaaacaccttggtaaaa-taacatttattttaataacaagataagggagt 483
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 625 agtaaaatactaaacaccttggtaaaaata-catttattttaataacaagataagggagt 683
Query: 484 ctaataaacatgattgtgaagaaaaattaatgtagatagaaagaatatgaacatcagtaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctaataaacatgattgtgaagaaaaattaatgtagatagaaagaatatgaacatcagtaa 743
Query: 544 acatactttatggtattcaaaataagttaggggaaatggtaggcagtctcaaaattaact 603
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acatattttatggtattcaaaataagttaggggaaatggtaggcagtctcaaaattaact 803
Query: 604 caaggatttattta 617
||||||||||||||
Sbjct: 804 caaggatttattta 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_l19.g1 MSMg01no417_l19.g1 CHROMAT_FILE:
MSMg01no417_l19.g1 PHD_FILE: MSMg01no417_l19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:43 2005
(577 letters)
>mm_chr16_64616974_64617950
Length = 977
Score = 1075 bits (556), Expect = 0.0
Identities = 559/560 (99%)
Strand = Plus / Minus
Query: 18 ttctgtctgtgacccacagtgctgacatgtaatgtgtattaaattaggacaaagagtagt 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 ttctgtctgtgacccacagtgctgacatgtaatgtgtattaaattaggacaaagagtagt 918
Query: 78 catagaggctgggccctgcttagtggtagaatatgattgtgtagcataccagtgggcaca 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 catagaggctgggccctgcttagtggtagaatatgattgtgtagcataccagtgggcaca 858
Query: 138 taacgtggtaggaccactttggaaaacatttcagcaatttctttaaaaacctgacatgtg 197
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 taatgtggtaggaccactttggaaaacatttcagcaatttctttaaaaacctgacatgtg 798
Query: 198 cttactatatgatgcagaaaaaaaattcctcacaaatttagttcatacaggttttcgttc 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 cttactatatgatgcagaaaaaaaattcctcacaaatttagttcatacaggttttcgttc 738
Query: 258 gttatagtaagtgaaatccacatattcttcactaggtgaagggatagtgaactatgaaga 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gttatagtaagtgaaatccacatattcttcactaggtgaagggatagtgaactatgaaga 678
Query: 318 attcacacaattaaaaattagttcaagttaacagcaacaaactagtaataataaaagaat 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 attcacacaattaaaaattagttcaagttaacagcaacaaactagtaataataaaagaat 618
Query: 378 tgaaaattctaaatatttggttctgttatatcttttgttgctcctaaatatcatgtacat 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tgaaaattctaaatatttggttctgttatatcttttgttgctcctaaatatcatgtacat 558
Query: 438 tgttatttcaactgttttcaaaatgtttctaaactactgataatataataagttcatata 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgttatttcaactgttttcaaaatgtttctaaactactgataatataataagttcatata 498
Query: 498 aaggattaccagatgagaaacatgaaaatactacttcatagataatgagacaaagctttg 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aaggattaccagatgagaaacatgaaaatactacttcatagataatgagacaaagctttg 438
Query: 558 ccttcttggactaccttcgg 577
||||||||||||||||||||
Sbjct: 437 ccttcttggactaccttcgg 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
