Query= MSMg01no419_g19.b1 MSMg01no419_g19.b1 CHROMAT_FILE:
MSMg01no419_g19.b1 PHD_FILE: MSMg01no419_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:58 2005
(224 letters)
>mm_chr16_62060830_62061453
Length = 624
Score = 426 bits (220), Expect = e-124
Identities = 223/224 (99%)
Strand = Plus / Plus
Query: 1 aaattttggctaagtagctgatatgagaacttgtaaatctttctttaattgttttccaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaattttggctaagtagctgatatgagaacttgtaaatctttctttaattgttttccaat 260
Query: 61 tttcatgtgttacatgttaataaatcatacaatcagagtttcatacaactgaacactggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcatgtgttacatgttaataaatcatacaatcagagtttcatacaactgaacactggt 320
Query: 121 ttctgaaacaaaatgtatcagtttcacttagcatggtggttcatgcctgaggtaggacaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 ttctgaaacaaaatgtatcagtttcacttagcatggtggttcatgcctgaggtaggacga 380
Query: 181 ctggaagatggctgggatggcctaaagtagagagcttgtatcag 224
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggaagatggctgggatggcctaaagtagagagcttgtatcag 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no419_g19.g1 MSMg01no419_g19.g1 CHROMAT_FILE:
MSMg01no419_g19.g1 PHD_FILE: MSMg01no419_g19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:58 2005
(521 letters)
>mm_chr16_62207848_62208767
Length = 920
Score = 930 bits (481), Expect = 0.0
Identities = 511/521 (98%), Gaps = 1/521 (0%)
Strand = Plus / Minus
Query: 1 ttaagtttactctgtgaatctgtactaattaaaattttctacaatattaaggaaatattt 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 720 ttaagtttactctgtgaatctgtactaattaaacttttctacaatattaaggaaatattt 661
Query: 61 gaatacaatactaggaaatataaagttgttattaaaatattccattttgaaaacaactta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gaatacaatactaggaaatataaagttgttattaaaatattccattttgaaaacaactta 601
Query: 121 ccaactgagaagtaagaatagaacaatatacagaatgttcaataggataatatacagaat 180
|||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 600 ccaactgagaggtaaaaatagaacaatatacagaatgttcaacaggataatatacagaat 541
Query: 181 gcttcaataaatatgttaaaataatctctatatatcagtgtcagtaaataaacaataaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gcttcaataaatatgttaaaataatctctatatatcagtgtcagtaaataaacaataaca 481
Query: 241 acttaaatattcaaaatttgaccttttaatgtgtaagtagttctgaagctggggaaggat 300
||||||||||||||| |||| || ||| ||||||||||||||||||||||||||||| ||
Sbjct: 480 acttaaatattcaaagtttggcc-tttcatgtgtaagtagttctgaagctggggaagtat 422
Query: 301 gttaagtagtctctggacagttcagtctaaggagaatgggaagaagctagaaactgtccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttaagtagtctctggacagttcagtctaaggagaatgggaagaagctagaaactgtccg 362
Query: 361 tggtgctgaaacaagggctgacacataagcattttcttctctgtagtctttaacacttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 361 tggtgctgaaacaagggctgacacataagcattttcttctctgtagtctttaatacttct 302
Query: 421 ttatactacatccatttcatgatatattttttgagctcagatatcatatgttataattac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttatactacatccatttcatgatatattttttgagctcagatatcatatgttataattac 242
Query: 481 acaaacccactgcatattttctaagattatccccctttctg 521
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaaacccactgcatattttctaagattatccccctttctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 920
Length adjustment: 10
Effective length of query: 511
Effective length of database: 910
Effective search space: 465010
Effective search space used: 465010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
