Query= MSMg01no421_c10.b1 MSMg01no421_c10.b1 CHROMAT_FILE:
MSMg01no421_c10.b1 PHD_FILE: MSMg01no421_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:12 2005
(298 letters)
>mm_chr16_83224125_83224822
Length = 698
Score = 493 bits (255), Expect = e-144
Identities = 287/303 (94%), Gaps = 12/303 (3%)
Strand = Plus / Minus
Query: 1 ttagcacagaatgttattttcagtacagaacaggaaagtgagctcacagtaacatatgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttagcacagaatgttattttcagtacagaacaggaaagtgagctcacagtaacatatgag 438
Query: 61 gcatttaaaaggaagattttcagtatttttaatatcattgcatgtatggatatttgccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gcatttaaaaggaagattttcagtatttttaatatcattgcatgtatggatatttgccta 378
Query: 121 taaactcagagaaatcaaaatagagaactctatagacttcaccacattgggcaattcatt 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 377 taaactcagagaaatcaaaatagagaactctataaacttcaccacattgggcaattca-- 320
Query: 181 ttaga----aagggagaagagtgaggttggaaagacacatgtaaggaggaaattagagtt 236
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 --agacagaaagggagaagagtgaggttggaaagacacatgtaaggaggaaattagagtt 262
Query: 237 acctatgaattgcg--tcctctgtatagaaaataatagtaataaaaaaactcattatttt 294
|||||| ||||| | | ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 acctataaattgtgatt--tctgtatagaaaataatagtaataaaaaacctcattatttt 204
Query: 295 taa 297
|||
Sbjct: 203 taa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_c10.g1 MSMg01no421_c10.g1 CHROMAT_FILE:
MSMg01no421_c10.g1 PHD_FILE: MSMg01no421_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:13 2005
(251 letters)
>mm_chr16_83029131_83029782
Length = 652
Score = 414 bits (214), Expect = e-120
Identities = 238/251 (94%), Gaps = 9/251 (3%)
Strand = Plus / Plus
Query: 1 tacccctcattggnggactattacttctgataatattgactatttactcagctgcagtat 60
||||||||||||| ||| |||||| ||||||||||||||| || |||||||||
Sbjct: 209 tacccctcattggtgga--------tctgatcatattgactatttacacatctgcagtat 260
Query: 61 gacttatatctcattcctccatctgaagaaacgaaagcaacagttaccacagccttcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacttatatctcattcctccatctgaagaaacgaaagcaacagttaccacagccttcatt 320
Query: 121 gatttcagtgacaattcagttaaagcacagaa-cctgactttaccacagaaaggaaatgt 179
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 gatttcagtgacaattcagttaaagcacagaaacctgactttaccacagaaaggaaatgt 380
Query: 180 caggatgatccaataaaaagcagaagaatgggaataatttcagcgtaaacacttttaaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggatgatccaataaaaagcagaagaatgggaataatttcagcgtaaacacttttaaaa 440
Query: 240 tgttattaaca 250
|||||||||||
Sbjct: 441 tgttattaaca 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 652
Length adjustment: 9
Effective length of query: 242
Effective length of database: 643
Effective search space: 155606
Effective search space used: 155606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
