Query= MSMg01no422_d16.b1 MSMg01no422_d16.b1 CHROMAT_FILE:
MSMg01no422_d16.b1 PHD_FILE: MSMg01no422_d16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:38 2005
(567 letters)
>mm_chr16_30756986_30757953
Length = 968
Score = 1000 bits (517), Expect = 0.0
Identities = 556/569 (97%), Gaps = 3/569 (0%)
Strand = Plus / Minus
Query: 1 gaggcagatggctgcttagaaaaaaataacgtcccatttctccctcacgttctagaccaa 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 768 gaggcagatggctgcttagaaaaaaataacgtcccatttgtccctcacgttctagaccaa 709
Query: 61 cactgatgccaggaggttccagggtaggatgcaaaagtagacattgttagtgtgatgtgc 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 708 cactgatgccaggaggttccagggtaggatgcaaaagcagacattgttagtgtgatgtgc 649
Query: 121 agctaggaagcctcacctctcttcccgtgacaccaaggcgattaacaaagagacagataa 180
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 648 agctaggaagcctcacctctcttcccgtgacaccaaggcggttaacaaagagacggataa 589
Query: 181 atttgtacaaacactaagagctctgtattcccaaattctacaaccatttcccttccttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atttgtacaaacactaagagctctgtattcccaaattctacaaccatttcccttccttgg 529
Query: 241 gtgttcctggaagggaa-tgtaagccacctctaatcatctcaacaacgggatgaagccat 299
||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gtgttcctggaagggaagag-aagccacctctaatcatctcaacaacgggatgaagccat 470
Query: 300 gagagaagcaaacgaagggaactcattaggggcatgttaggatgtcagctgtgccacagg 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 469 gagagaagcaaacgaagggaactcattaggggcatgttatgatgtcagctgtgccacagg 410
Query: 360 ctacaat-agaagctgtgaggcaagagaccccaagaaccattgccaagagagccatgctc 418
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctacaatgagaagctgtgagggaagagaccccaagaaccattgccaagagagccatgctc 350
Query: 419 accccccacccccactcctcagcaagggcatccatgtctggggaggagtctagagacccc 478
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 349 accccccacccccactcctcagcaagggcttccatgtctggggaggagtctagagactcc 290
Query: 479 tgctagtttctccactccttggtccagtagtagaatgtactagctacttaggggaaggaa 538
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tgctagtttccccactccttggtccagtagtagaatgtactagctacttaggggaaggaa 230
Query: 539 acaaagatctgtcaggttgcttgcttaaa 567
|||||||||||||||||||||||||||||
Sbjct: 229 acaaagatctgtcaggttgcttgcttaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 968
Length adjustment: 10
Effective length of query: 557
Effective length of database: 958
Effective search space: 533606
Effective search space used: 533606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_d16.g1 MSMg01no422_d16.g1 CHROMAT_FILE:
MSMg01no422_d16.g1 PHD_FILE: MSMg01no422_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:38 2005
(495 letters)
>mm_chr16_30589076_30589969
Length = 894
Score = 882 bits (456), Expect = 0.0
Identities = 485/495 (97%), Gaps = 1/495 (0%)
Strand = Plus / Plus
Query: 1 tctgtttcccagcatagaagcacgactgtaaaatctctgaacacactttccaggaggaag 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tctgtttcccagcatagaagcacgactgtaaaatctctgaacacactctccaggaggaag 260
Query: 61 atagagagaagatacacaaatagaattagagacagcatctgttttttggttttttttttt 120
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 261 atagagagaagatacacaaatagaattagagacagcatctg-tttttgtttttttttttt 319
Query: 121 tatgcaagagcaagagaaattttatttaatccagcatgcaggggtcaccctgcatatagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tatgcaagagcaagagaaattttatttaatccagcatgcaggggtcaccctgcatatagg 379
Query: 181 gagagaacgaccgcatctggcactgttaaagttaaccctaactcaaggaaacgatgaggg 240
|||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 380 gagagagcgaccgcatctggcactgttaaagttaaccctaactcaaggaaatgaagaggg 439
Query: 241 ttatgcatttnattattggcaacactaatagagagtttagagaaaatggccatctcatta 300
|||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttatgcattttaataatggcaacactaatagagagtttagagaaaatggccatctcatta 499
Query: 301 ctagagtaaccattcaaccagtaactcaaggcttcaccttagtttccttttccagagcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctagagtaaccattcaaccagtaactcaaggcttcaccttagtttccttttccagagcat 559
Query: 361 ttgaaaaaggaaaccctcttggttggttggttagttagttagtttgtttaagacagactc 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgaaaaaggaaaccctcttggctggttggttagttagttagtttgtttaagacagactc 619
Query: 421 atatccctcgtcccatacggtttctctgtgtagtcctagctgttctggaattcactctgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atatccctcgtcccatacggtttctctgtgtagtcctagctgttctggaattcactctgt 679
Query: 481 agaccaggtttgcct 495
|||||||||||||||
Sbjct: 680 agaccaggtttgcct 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 894
Length adjustment: 10
Effective length of query: 485
Effective length of database: 884
Effective search space: 428740
Effective search space used: 428740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
