Query= MSMg01no423_b24.b1 MSMg01no423_b24.b1 CHROMAT_FILE:
MSMg01no423_b24.b1 PHD_FILE: MSMg01no423_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:43 2005
(459 letters)
>mm_chr16_43217024_43217882
Length = 859
Score = 864 bits (447), Expect = 0.0
Identities = 453/455 (99%)
Strand = Plus / Plus
Query: 5 gaattcatgtcttataaacacaatagcttagatgtttaaaataacttcttattcatttac 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgtcttagaaacacaatagcttagatgtttaaaataacttcttattcatttac 264
Query: 65 aggaaatccaaattgtctttttcttctaaaatcttttgctgttcacttttaaatccccat 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggaaatccagattgtctttttcttctaaaatcttttgctgttcacttttaaatccccat 324
Query: 125 tcaacttagccccactccaagggcagcgaaattcaccttcctgtgttgactatgtatagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaacttagccccactccaagggcagcgaaattcaccttcctgtgttgactatgtatagg 384
Query: 185 tactttaggatcttaatttatgctaaaggacctaagcaactattgtattagaatcttaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tactttaggatcttaatttatgctaaaggacctaagcaactattgtattagaatcttaaa 444
Query: 245 acttcttgtaggtttgaaaatgcttgtctcttcagcatccaatgctgcattttaagaata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acttcttgtaggtttgaaaatgcttgtctcttcagcatccaatgctgcattttaagaata 504
Query: 305 tctaactagaccaatcaggacagattctgggccttctgtgtcaactagttactcaaaact 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctaactagaccaatcaggacagattctgggccttctgtgtcaactagttactcaaaact 564
Query: 365 tcctgggtataatagagcttagcaaagtaaataaaggaagaacaatgtcttctgccctca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcctgggtataatagagcttagcaaagtaaataaaggaagaacaatgtcttctgccctca 624
Query: 425 aggaagttggcatagggttatgatgatgaatagat 459
|||||||||||||||||||||||||||||||||||
Sbjct: 625 aggaagttggcatagggttatgatgatgaatagat 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_b24.g1 MSMg01no423_b24.g1 CHROMAT_FILE:
MSMg01no423_b24.g1 PHD_FILE: MSMg01no423_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:44 2005
(484 letters)
>mm_chr16_43425769_43426652
Length = 884
Score = 893 bits (462), Expect = 0.0
Identities = 484/504 (96%), Gaps = 20/504 (3%)
Strand = Plus / Minus
Query: 1 ctccatcagatagatgggagagtggacctctcttgactgctggtggatatgggactgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 ctccatcagatagatgggagagtggacctctcttgactgctggtggatatgggactgtgg 639
Query: 61 gcactgccagtcctgggcaggtttacataagaagggcagctgagcaaggcagggtgaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gcactgccagtcctgggcaggtttacataagaagggcagctgagcaaggcagggtgaaac 579
Query: 121 aaaccagtcagcagcaagcatccatggagtcagttcctgctgggtttcaatgctgagcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 aaaccagtcagcagcaagcatccatggagtcagttcctgctgggtttcaatgctgagcta 519
Query: 181 taagctcatattaactcttactccacaagatgctttgggtcagtgtttaatcatagcaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 taagctcatattaactcttactccacaagatgctttgggtcagtgtttaatcatagcaac 459
Query: 241 agggattcaaactagggtaactgtaaaacttttagctaatatgagctctcttaggaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agggattcaaactagggtaactgtaaaacttttagctaatatgagctctcttaggaaata 399
Query: 301 agctgtatacagcatgaataacaaacaaacaa--------------------gcaaacct 340
|||||||||||||||||||||||||||||||| ||||||||
Sbjct: 398 agctgtatacagcatgaataacaaacaaacaaacaaacaaacaaacaaacaagcaaacct 339
Query: 341 acagctttctaaaccaaagacttctattctctaaacttattctaatatggattaacctag 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 acagctttctaaaccaaagacttctattctctaaacttattctaatatggattaacctag 279
Query: 401 gatatacttttaagactaaacaaaaggtaaggatttgaacagttataaaacacaactgag 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gatatacttttaagactaaacaaaaggtaaggatttgaacagttataaaacacaactgag 219
Query: 461 agcaatggctattttatgagggtg 484
||||||||||||||||||||||||
Sbjct: 218 agcaatggctattttatgagggtg 195
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
