Query= MSMg01no425_l18.b1 MSMg01no425_l18.b1 CHROMAT_FILE:
MSMg01no425_l18.b1 PHD_FILE: MSMg01no425_l18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:02 2005
(539 letters)
>mm_chr16_25493965_25494903
Length = 939
Score = 911 bits (471), Expect = 0.0
Identities = 517/537 (96%), Gaps = 12/537 (2%)
Strand = Plus / Plus
Query: 5 gaattctgacaattatctccaggacttctaagcatgcagcatgaacaacaccaagtaata 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgacaattacctccaggacttctaagcatgcagcatgaacaacaccaagtaata 264
Query: 65 gaaattcactgtggacgcg-tagaac-gcctttagtctcaaggtcctagctgaaaacaat 122
||||||||||||||| | | ||| || ||||| |||||||||||||||||||||||||||
Sbjct: 265 gaaattcactgtggatg-gatag-actgccttcagtctcaaggtcctagctgaaaacaat 322
Query: 123 ctatctgtgttgctctgaaaggatagggccagctgcatcacaagcttcatgaaatgatct 182
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 323 ctatctgtgttgctctgaaaggatagggccaactgcatcacaagcttcatgaaatgatct 382
Query: 183 gagaaacgaagcttagaaaccacagggacttcttggaaagctagtgaaaagcccagcttc 242
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 383 gagaaacgaagcttagaaaccacagggacttcttggaaagctggtgaaaagcccagcttc 442
Query: 243 cccaaagtccagccactagtttccattccagctataacagttgtaatgcaaaaaaaaaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 443 cccaaagtccagccactagtttccattccagctataacagttgtaatgc--------aaa 494
Query: 303 aaaaaaaaaaaaaaaaaaggaactggtctgtcactgaaaatatttctgctaaggtccagg 362
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aaaaaaaaaaaaaaaaaagtaactggtctgtcactgaaaatatttctgctaaggtccagg 554
Query: 363 acacctaagcacctgtcctgaagttgtacaggttatgaaaatgtgtttttcaatgttctc 422
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 555 acacctaagcacctgtcctgaagttgtacaggttatgaaaatgtgtttgtcaatgttctc 614
Query: 423 tacaagcacggtgcaagctcaagctagaccaaatcccagcatggacaggggagatgatca 482
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 615 tacaagcacggtgcaagctcaagctagaccaaatcccagcacggacaggggagatgatca 674
Query: 483 tgagaatgaagtcacactcctagctgagaatctattggcatttgacagttgctggga 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tgagaatgaagtcacactcctagctgagaatctattggcatttgacagttgctggga 731
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_l18.g1 MSMg01no425_l18.g1 CHROMAT_FILE:
MSMg01no425_l18.g1 PHD_FILE: MSMg01no425_l18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:02 2005
(448 letters)
>mm_chr16_25662169_25663014
Length = 846
Score = 677 bits (350), Expect = 0.0
Identities = 369/376 (98%), Gaps = 3/376 (0%)
Strand = Plus / Minus
Query: 1 ttttttggaggaaaatgggcttgtctctttccagtgttctgctaccctattattcagctg 60
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 373 ttttttggaggaaagtgggcttgtctctttccagtgttctgctactctattattcagctg 314
Query: 61 ccaggcttttgagatgaattatcaatagatgttagactagtgtgaatgttggggggttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccaggcttttgagatgaattatcaatagatgttagactagtgtgaatgttggggggttga 254
Query: 121 tcactgaaagcaaaacaactctttcttgtgttaattttttttttctaatggttaatgtac 180
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 253 tcactgaaagcaaaacaactctttcttgtgtta--tttttttttctaatggttaatgtac 196
Query: 181 tggctagttttgtttcaacttgacacaagctggagttatcacagagaaaggagcttcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tggctagttttgtttcaacttgacacaagctggagttatcacagagaaaggagcttcagt 136
Query: 241 tggggaaatgcctctacaagatccagctgtaaagcattttctcaattagtgatcaagggg 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 135 tggggaaatgcctctacaagatctagctgtaaagcattttctcaattagtgatcaagggg 76
Query: 301 gggaggtccccttgtgggtggtgctatctctaggctggtagtcttaattctataagagag 360
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 75 gg-aggtccccttgtgggtggtgccatctctaggctggtagtcttaattctataagagag 17
Query: 361 caggctgagcaaagcc 376
||||||||||||||||
Sbjct: 16 caggctgagcaaagcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 846
Length adjustment: 10
Effective length of query: 438
Effective length of database: 836
Effective search space: 366168
Effective search space used: 366168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
