Query= MSMg01no425_p24.b1 MSMg01no425_p24.b1 CHROMAT_FILE:
MSMg01no425_p24.b1 PHD_FILE: MSMg01no425_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:22 2005
(464 letters)
>mm_chr16_79191586_79192449
Length = 864
Score = 787 bits (407), Expect = 0.0
Identities = 447/469 (95%), Gaps = 16/469 (3%)
Strand = Plus / Minus
Query: 5 gaattcttaaggattttcaattatatgtagtgaaacaagtaaggcagaaatctatatttt 64
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 629 gaattcttaaggattttgaattatatgtagtgaaacaagtaaggcagtaatctatatttt 570
Query: 65 ttgatttatgtcatagctacattttctacaatttatgtaaagggaaaatttttaatcaag 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tttatttatgtcatagctacattttctacaatttatgtaaagggaaaatttttaatcaag 510
Query: 125 tttcaacaattgttggggaattttatttcttacaacaaattttacctctctttgagtaaa 184
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 509 tttcaacaattgttggggaattttatttcttacaacaaattttacctttctttgagtaaa 450
Query: 185 tagtagttaaactaaaaacggtgttaacactgtgaggtgtctcatgaagtaatgtctcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tagtagttaaactaaaaacggtgttaacactgtgaggtgtctcatgaagtaatgtctcag 390
Query: 245 ccttctcttagcaatgctaaaatcatacactgtctttttagtcatataagttatgctggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ccttctcttagcaatgctaaaatcatacactgtctttttagtcatataagttatgctggg 330
Query: 305 aactgggattcacaagtaaatgcatttttcttccaatatttccaacataacgacaacttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aactgggattcacaagtaaatgcatttttcttccaatatttccaacataacgacaacttg 270
Query: 365 tatccacgaaagtgggcaggcaccatactcagcagcacgtggaggttagggcttgccttc 424
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 taaccacgaaagtgggcaggcaccatactcagcagcacgtggaggttagggcttgccttt 210
Query: 425 taatttgatttaa----t-----taatttgatgaacaaatatgcccatg 464
||||| | | ||||||||||||||||||||||||||
Sbjct: 209 taatt-------aggcctcgggctaatttgatgaacaaatatgcccatg 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_p24.g1 MSMg01no425_p24.g1 CHROMAT_FILE:
MSMg01no425_p24.g1 PHD_FILE: MSMg01no425_p24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:22 2005
(418 letters)
>mm_chr16_79029801_79030618
Length = 818
Score = 698 bits (361), Expect = 0.0
Identities = 385/393 (97%), Gaps = 1/393 (0%)
Strand = Plus / Plus
Query: 1 aaactctctcctgtcaacaccccaattaaagctgtaaattctaggcatgcactgatgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaactctctcctgtcaacaccccaattaaagctgtaaattctaggcatgcactgatgctg 260
Query: 61 atgcagagcctgggaaggtgactctggtttctagaaaattattggtcttcttcaaaaaga 120
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 261 atgcagagcctgggaaggtgactctggtttctagaaaattgttggtcttcttcaaaaaaa 320
Query: 121 atataggctgacttaaatggcttcatgtgccttagtgtgtatataagataactaaatcta 180
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 atataggctgacttaaatggtttcatgtgccttagtgtgtatataaggtaactaaatcta 380
Query: 181 ctagataaatattaccaagagttttactataaagactggtctaaattcagttttctaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctagataaatattaccaagagttttactataaagactggtctaaattcagttttctaaaa 440
Query: 241 tactataaagtttccaaaattttctaaaattgaatacaacagtaagacaagacaaatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tactataaagtttccaaaattttctaaaattgaatacaacagtaagacaagacaaatgag 500
Query: 301 aagaatattactttaaaaggacataaactacactaaaagaaatatttatttgctaagttg 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 aagaatattactttaaaaggacataaactacattaaaagaaatatttatttgctaagttg 560
Query: 361 aaatgaaatttttaaaagaatatatatatatat 393
|||||||||||||||||||| | | ||||||||
Sbjct: 561 aaatgaaatttttaaaagaaaaaa-atatatat 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
