Query= MSMg01no427_d04.b1 MSMg01no427_d04.b1 CHROMAT_FILE:
MSMg01no427_d04.b1 PHD_FILE: MSMg01no427_d04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:00 2005
(359 letters)
>mm_chr16_91107850_91108608
Length = 759
Score = 603 bits (312), Expect = e-177
Identities = 353/376 (93%), Gaps = 17/376 (4%)
Strand = Plus / Plus
Query: 1 gcaaactgtcaagcagagagcctgcctaatcacgcggaaatcttgcactgtcacagcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gcaaactgtcaagcagagagcctgcctaatcacgcggaaatcttgcactgtcacagcccc 243
Query: 61 tccccttcccataaagctgcttcagctccatccttgcatcagcatcacttaaccatctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tccccttcccataaagctgcttcagctccatccttgcatcagcatcacttaaccatctcc 303
Query: 121 ccccc---ccccccccccc-ggcttcgcgagtcccctccccaca-------------gcc 163
||||| ||||||||||| | |||||||||||||||||||||| |||
Sbjct: 304 ccccccctccccccccccctgccttcgcgagtcccctccccacaacccctccccgaggcc 363
Query: 164 cctccccacagcccctccctgaagctcctcccagagttggctgtcacactggcctttcca 223
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 364 cctccccacagcccctccctgaggctcctcccagagttggctgtcacactggcctttcca 423
Query: 224 gttctcctctggaatggcaagcagcttcctagaggatgaaagttaaagtaagtctcctac 283
|||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 424 gttctcctctggaatgtcaagcagcttccgacaggatgaaagttaaagtaagtctcctac 483
Query: 284 ctacagacacccactccaagagactggagtccctcctccctccagtccttcccaaacagc 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctacagacacccactccaagagactggagtccctcctccctccagtccttcccaaacagc 543
Query: 344 tccaactgaccaagta 359
||||||| ||||||||
Sbjct: 544 tccaactaaccaagta 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_d04.g1 MSMg01no427_d04.g1 CHROMAT_FILE:
MSMg01no427_d04.g1 PHD_FILE: MSMg01no427_d04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:00 2005
(511 letters)
>mm_chr16_91287565_91288475
Length = 911
Score = 754 bits (390), Expect = 0.0
Identities = 414/422 (98%)
Strand = Plus / Minus
Query: 89 cagtgtttctcagcctgtgggttgggaccccctctgcaggggttgcagaagatcatttga 148
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 911 cagtgtttctcaacctgtgggttgggaccccctctgcaggggttgcagaagatcgtctga 852
Query: 149 aaacacagatatttacaattcataacagtagcaaaattacatttacaaagtagcaacgaa 208
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 851 aaacacagatatttacaattcataacagtagcaaaattacagttacaaagtagcaacgaa 792
Query: 209 aataattttatggttggatgtcaccacaacataaagaactgtattatacggtcgaagcag 268
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 791 aataattttatggttgggtgtcaccacaacataaagaactgtattaaacggtcgaagcag 732
Query: 269 ttggaaggctgagaaccgctgtggtagagtgtcttagccgtatgtctttaaaattgaaca 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ttggaaggctgagaaccgctgtggtagagtgtcttagccgtatgtctttaaaattgaaca 672
Query: 329 ttcatgagttcattgatcctcacagtcacagtcattctcaaggatagagcctctgttgtg 388
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ttcatgaattcattgatcctcacagtcacagtcattctcaaggatagagcctctgttgtg 612
Query: 389 tggttttagaactctatttaagccggaactaaaccccaaatagaacctatttgggagtaa 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tggttttagaactctatttaagccggaactaaaccccaaatagaacctatttgggagtaa 552
Query: 449 taaactacacgtgtctgttttgtttaaatcatttttattttggtaaaatatccataatgt 508
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 551 taaactacacgtgtctgttttgtttaaattatttttattttggtaaaatatccataatgt 492
Query: 509 ga 510
||
Sbjct: 491 ga 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
