Query= MSMg01no427_n20.b1 MSMg01no427_n20.b1 CHROMAT_FILE:
MSMg01no427_n20.b1 PHD_FILE: MSMg01no427_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:51 2005
(360 letters)
>mm_chr16_17607289_17608048
Length = 760
Score = 634 bits (328), Expect = 0.0
Identities = 354/370 (95%), Gaps = 13/370 (3%)
Strand = Plus / Plus
Query: 1 caaaaacataagacagtttccagaaaaaatatcacatgacataactgagtctccaaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 194 caaaaacataagacagtttccagaaaaaatatcacatgacataactgagtctccaaacaa 253
Query: 61 accagaaatttccacttctctccagtctgctctattacatgggcagcaaggacagcactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 accagaaatttccacttctctccagtctgctctattacatgggcagcaaggacagcactg 313
Query: 121 ctgtatatattttgatttctagatttcacatggtaaaaagagagatccaacttccagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctgtatatattttgatttctagatttcacatggtaaaaagagagatccaacttccagaag 373
Query: 181 atattctttgactttgacttcctcatatactgccacc----------cccccccactact 230
||||||||||||||||||||| || |||||||||| |||||||||||||
Sbjct: 374 atattctttgactttgacttc---atgtactgccaccatcccccccccccccccactact 430
Query: 231 tgggagacctctccatcgatggggcatgctgactactgcgaagacccttagatatggaag 290
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 431 tgggagacctctccatcgatggggcatgctgactactgcgaagacccttagaaatggaag 490
Query: 291 gcttagtgagtatggtagtgtatgccttcagttcaaccatgcagaaggctaggggtttat 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gcttagtgagtatggtagtgtatgccttcagttcaaccatgcagaaggctaggggtttat 550
Query: 351 gagttctaga 360
||||||||||
Sbjct: 551 gagttctaga 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_n20.g1 MSMg01no427_n20.g1 CHROMAT_FILE:
MSMg01no427_n20.g1 PHD_FILE: MSMg01no427_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:51 2005
(466 letters)
>mm_chr16_17778518_17779383
Length = 866
Score = 901 bits (466), Expect = 0.0
Identities = 466/466 (100%)
Strand = Plus / Minus
Query: 1 aaagaaagaaaataaaagaacaagtggaaacaaagacaaaattaatttgtttcacaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaagaaagaaaataaaagaacaagtggaaacaaagacaaaattaatttgtttcacaaggc 482
Query: 61 aatttcttacagtttcaacatcagagttctagtacacacctgctaaacactgtcctcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatttcttacagtttcaacatcagagttctagtacacacctgctaaacactgtcctcaga 422
Query: 121 ttgcaaaactttatttactgtaaaatattgttttcttatattctaagagcttatagattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgcaaaactttatttactgtaaaatattgttttcttatattctaagagcttatagattt 362
Query: 181 caatctgttaaactatgaataggaagaaagaaagaaactcagaaaaatctatttcaggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caatctgttaaactatgaataggaagaaagaaagaaactcagaaaaatctatttcaggga 302
Query: 241 ttcagccactgtgattttccggcagaatgaccatggatttaaggacatcctcactactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcagccactgtgattttccggcagaatgaccatggatttaaggacatcctcactactca 242
Query: 301 gctagtgcaagtttgaccaaaaacaaaacaaaccacacaagtgctggggtggaggtggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctagtgcaagtttgaccaaaaacaaaacaaaccacacaagtgctggggtggaggtggaa 182
Query: 361 tccagggccttgtgcatgctagggaaacatttgatgctgagctgcaccctcagctttgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccagggccttgtgcatgctagggaaacatttgatgctgagctgcaccctcagctttgta 122
Query: 421 aggtttgagatgactgggaagtaaatgaagcttccgttcggtggag 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggtttgagatgactgggaagtaaatgaagcttccgttcggtggag 76
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
