Query= MSMg01no429_h23.b1 MSMg01no429_h23.b1 CHROMAT_FILE:
MSMg01no429_h23.b1 PHD_FILE: MSMg01no429_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:00 2005
(419 letters)
>mm_chr16_34076090_34076908
Length = 819
Score = 799 bits (413), Expect = 0.0
Identities = 416/417 (99%)
Strand = Plus / Minus
Query: 3 ggaattccagtccttaagcttgcatgacaaatgccttgccccctgagcctacccctttcc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ggaattccagtccttaagcttgcatgacaaatgccttgccccctgagcctacccctttcc 560
Query: 63 caggtcctttttttttttttttttaatgtttcattaaacttttttgcttttctaaaatcc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 caggtcctttttttttttttttttaatgtttcattaaacttttttgcttttctaaaatcc 500
Query: 123 ctgcaataaaaattacttttataactaaaaagaaatgacaaaattaaagcttaagtgggt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctgcaataaaaattacttttataactaaaaagaaatgacaaaattaaagcttaagtgggt 440
Query: 183 gagagtgtaaagatgtcataaatgaggacagagtcccacactgtgaggcagcctcaaggc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gagagtgtaaagatgtcataaatgaggacagagtcccacactgtgaggcagcctcaaggc 380
Query: 243 tctgtcctccaagtgctggaatgagtatctccatgtagggccgagagatgcacatcacaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tctgtcctccaagtgctggaatgagtatctccatgtagggccgagagatgcacatcacaa 320
Query: 303 gtgcagcccctccctgtcctggtcctgagccagctgtgtccttagtcatttgtgtgtcat 362
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 319 gtgcagcccctccctgtcctggtcctgagccagctgtgcccttagtcatttgtgtgtcat 260
Query: 363 ttccacagtcgctatactggggacattgcaggcagttccttcagccccagttttctg 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttccacagtcgctatactggggacattgcaggcagttccttcagccccagttttctg 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_h23.g1 MSMg01no429_h23.g1 CHROMAT_FILE:
MSMg01no429_h23.g1 PHD_FILE: MSMg01no429_h23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:00 2005
(308 letters)
>mm_chr16_33937999_33938706
Length = 708
Score = 511 bits (264), Expect = e-149
Identities = 299/314 (95%), Gaps = 6/314 (1%)
Strand = Plus / Plus
Query: 1 cactgctgagccccactgtgatgacttccaaagtcctgctctccagtcttgaactcacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactgctgagccccactgtgatgacttccaaagtcctgctctccagtcttgaactcacct 260
Query: 61 gtgggtggacactcagtacattcaatctcctgcttgtcgtgatgatgtcagccttagcaa 120
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 261 gtgggtggacactcagtacattcaatctcctgcttttcttgatgatgtcagccttagcaa 320
Query: 121 caggcaccaaggaggaagagacgctgctaaaacagtcagcctttaaaatgagccacttat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggcaccaaggaggaagagacgctgctaaaacagtcagcctttaaaatgagccacttag 380
Query: 181 agagagagtgagagagagacagagacagagacagag------tgttcagtggttaacaac 234
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 agagagagtgagagagagacagagacagagacagagacagagtgttcagtggttaacaac 440
Query: 235 acttgctgttattgttgtttaaactccaattcccagcacgcatgtcaggaggtttataac 294
|||||||||||||| || |||||||||||||||||||||||||||||||| ||| |||
Sbjct: 441 acttgctgttattgctgaacaaactccaattcccagcacgcatgtcaggaggcttacaac 500
Query: 295 agcctgccaagtcc 308
||||||||||||||
Sbjct: 501 agcctgccaagtcc 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space: 209001
Effective search space used: 209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
