Query= MSMg01no433_f01.b1 MSMg01no433_f01.b1 CHROMAT_FILE:
MSMg01no433_f01.b1 PHD_FILE: MSMg01no433_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:22 2005
(281 letters)
>mm_chr16_54900553_54901233
Length = 681
Score = 482 bits (249), Expect = e-140
Identities = 273/281 (97%)
Strand = Plus / Plus
Query: 1 aatacaaggagaacagacttgagatgagacttggcagaacactatgagatgcacatgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatacaaggagaacagacttgagatgagacttggcagaacactatgagatgcacatgtga 260
Query: 61 cctggatgtctcacatgaaatgcttcttctcttaacacactggttctctgagtctgagac 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctggatgtctcacttgaaatgcttcttctcttaacacactggttctctgagtctgagac 320
Query: 121 tagagtagcagcctcagaggtctctagctttctctcaatgttcctgaacttgtgaatggc 180
|||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 321 tagagtagcagcctcagaggtctctagctttccctcaatgttcctgtacttgtgaatggt 380
Query: 181 agctggcttcttctatgttctatgcctctttccaagcatcaagacatggataaaatttag 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 agctggcttcttctatgttctatgcctccttccaagcatcaagacatggataaaatttag 440
Query: 241 ctacttctttgccaacttattaaaataatcaccttttactt 281
||||||||||||||| || |||||||||||||| |||||||
Sbjct: 441 ctacttctttgccaatttgttaaaataatcaccctttactt 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_f01.g1 MSMg01no433_f01.g1 CHROMAT_FILE:
MSMg01no433_f01.g1 PHD_FILE: MSMg01no433_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:22 2005
(154 letters)
>mm_chr16_55075114_55075666
Length = 553
Score = 248 bits (128), Expect = 2e-70
Identities = 141/146 (96%), Gaps = 3/146 (2%)
Strand = Plus / Minus
Query: 1 cttaacaggaaaaaaaaaataggagcagtgtgattagcttttccttcaaagaaaggaaag 60
||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 309 cttaacagg--aaaaaaaataggatcagtgtgattagcttttccttcaaagaaaggaaag 252
Query: 61 -aacctaaatctgtttggcaaattgggaaatatttcctagtcccagaatactatttatgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 251 aaacctaaatctgtttggcaaattgggaaatatttcctagtcccagaatactatgtatgt 192
Query: 120 atgtatgtatgtatgtatgtatgtat 145
||||||||||||||||||||||||||
Sbjct: 191 atgtatgtatgtatgtatgtatgtat 166
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 154
Length of database: 553
Length adjustment: 8
Effective length of query: 146
Effective length of database: 545
Effective search space: 79570
Effective search space used: 79570
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
