Query= MSMg01no433_k17.b1 MSMg01no433_k17.b1 CHROMAT_FILE:
MSMg01no433_k17.b1 PHD_FILE: MSMg01no433_k17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:49 2005
(272 letters)
>mm_chr16_30513327_30514000
Length = 674
Score = 464 bits (240), Expect = e-135
Identities = 264/272 (97%), Gaps = 4/272 (1%)
Strand = Plus / Minus
Query: 4 ggaattcaaagcctctttatctgctctgggctctcggctctcttgtgaggtggcttg-tt 62
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 474 ggaattcaaagccactttatctgctctgggctctcggctctcttgtgaggtggcttgctt 415
Query: 63 gaagtcagctctgctctgtcgtcttacccactgaaaccactgtgaggagtggaccat-gg 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 414 -aagtcagctctgctctgtcgtcttacccactgaaaccactgtgaggagtggaccatggg 356
Query: 122 gggatgtggtgaagtggaacattccagcctggaacattcaaatctagaggcagggaaggg 181
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 355 gggatgtggtgaagtggaacactccagcccggaacattcaaatctagaggcagggaaggg 296
Query: 182 tggagatctagtcaaggaaggagaaacctgacgtggccggcatggctggtgtgacatggt 241
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 295 tggagatctagtcaaggaaggagaaacctgacgtggccggcatgactggtgtgacatggt 236
Query: 242 tttg-aaggagagagctggaaaagagcgggct 272
|||| |||||||||||||||||||||||||||
Sbjct: 235 tttgtaaggagagagctggaaaagagcgggct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 674
Length adjustment: 9
Effective length of query: 263
Effective length of database: 665
Effective search space: 174895
Effective search space used: 174895
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_k17.g1 MSMg01no433_k17.g1 CHROMAT_FILE:
MSMg01no433_k17.g1 PHD_FILE: MSMg01no433_k17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:49 2005
(290 letters)
>mm_chr16_30392143_30392832
Length = 690
Score = 553 bits (286), Expect = e-162
Identities = 289/290 (99%)
Strand = Plus / Plus
Query: 1 ctcctctttattactcctttttactcttttgtcctctctcttacacacacacacacacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcctctttattactcctttttactcttttgtcctctctcttacacacacacacacacac 260
Query: 61 acacacactgcctaaaaaccaaaggtaacacctctagtgtatgcaatgacatattcttcc 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacacactgcctaaaaacgaaaggtaacacctctagtgtatgcaatgacatattcttcc 320
Query: 121 caggtaaccttatctaccatgggtgtagctatcatctgcttgtacattaataactctcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggtaaccttatctaccatgggtgtagctatcatctgcttgtacattaataactctcaa 380
Query: 181 ctgcatccctatagcccattcctttcttgcaagacagaaccatacatacctccctgccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgcatccctatagcccattcctttcttgcaagacagaaccatacatacctccctgccta 440
Query: 241 gcttggttgttgttgtttattttgttttttaaattgtatggtgagagtga 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcttggttgttgttgtttattttgttttttaaattgtatggtgagagtga 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
