NNTTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATTAGTTTATTCAGAATATGTATATATATGTCATACATATAT
ACACATACATACATACATACATACATACATACATACATACATGTTTGTTT
ACTATTTGAGAGTGCTGAGCTTTGGTAGTGTAATTATTAATCAGATCATC
ATCCAGTGTGGTGATGGCTAAGATATAGAATGTCTGAGATAGTGTGATAG
AGGAATGACTTTCTGAAAAAGTTGTTTTCTGATCCTGTACAATGAATAAA
TCAGGTCTAGAGAGGGTGGAAGTTGGTTGCAGCCTTTGGATCCATGAGTG
CTATTCTGCTGAACATGCAAGCCAAGAGCACACTACGTAAGGTAAGCCTG
GTGGCACAGGTTATGACAGGCTGTGTGAGAGATGAAAGAATTTCAGTATT
TCATCAATAAGGTAGGTCAAGGATTCAGAAGAAAAGGGTAAGGTCACATT
GTTGCTAAAACAATTGTGAATATCTATAAGTGGAATGGGACAAGAATGTT
AGGAAACTATATTGGCACCATGAATGGGCTGTTATGAGCATTTAGAAGTA
GCCAACTAGAGTAACAGTACTCAGACAAGGAAGGATGGAAGGGTAGCAAC
AGCAGACTAGATCAGTGGGTATATTTACNACATGAACAGACACTCCGGGA
AAACTACTCAATGTGGAAAGATAGGGAGTTGTCTGTAAAAGC

CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGATCCCAGTATCACAGGAGC
TTGGTCACACCACAATCCCAGGGTCTCAGAGGGAGCTTGACTCCCAGGAA
CTCTGACACACCCAGAATCTCAGGATAAAAGGATCCTGGAATCACAGGAT
CACAGAGAAAGCTGGACTCTGAGGAGTTCTGATTCACCTGGGATTACAGG
AAAAACAGGCTTCAATGAGATATAGCTAGGGCAGGGAGCACTTGGGATAA
TCAGATGGCTGAAGGCAAGCATAAGAACAGAAACCAAGGTTACTTGACAT
CATCAAAACCCAATTCTCCTACCATAGCAAGTCCTGGACAGACCACCACA
CAGGAAAAGAAAGATTCAAATATAAAATGACTTCTCCTGATGGTGATAGA
GAACTTTAAGAAGACCATAAATAACTCCCTTAAAGAAATACAAGGGAGCA
CAAGTAAACAAGTAGAAACCCTTAAAGAGGAAACACAAAAATCCCTTAAA
GAATTACAGGAAAATAAAACCAAACAGGCAAAGAAATTGAACAAAACCAT
CCCAGATCTAAAAATGAAAGTACAAACAATAAAAAAATAATCCCAAAGGG
AGACCACTCTGTAGTTAGAAACCCTAGGAAAGAAGTCAGGAGCCATAGAT
ACAAGTTTCCCCCCCCGAATACNGGAGATAGAAGAGAGAATCATAGGGGC
AGAAG

Query= MSMg01no436_l07.b1 MSMg01no436_l07.b1 CHROMAT_FILE:
MSMg01no436_l07.b1 PHD_FILE: MSMg01no436_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:51 2005
         (608 letters)



>mm_chr16_51703675_51704682
          Length = 1008

 Score = 1102 bits (570), Expect = 0.0
 Identities = 590/604 (97%), Gaps = 12/604 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattagtttattcagaatatgtatatatatgtcatacatatatacacatacatac 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct: 886 gaattcattagtttattcagaatatgtatatatatgtcatacatatatac---------- 837

                                                                       
Query: 65  atacatacatacatacatacatacatacatgtttgtttactatttgagagtgctgagctt 124
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 --acatacatacatacatacatacatacatgtttgtttactatttgagagtgctgagctt 779

                                                                       
Query: 125 tggtagtgtaattattaatcagatcatcatccagtgtggtgatggctaagatatagaatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tggtagtgtaattattaatcagatcatcatccagtgtggtgatggctaagatatagaatg 719

                                                                       
Query: 185 tctgagatagtgtgatagaggaatgactttctgaaaaagttgttttctgatcctgtacaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tctgagatagtgtgatagaggaatgactttctgaaaaagttgttttctgatcctgtacaa 659

                                                                       
Query: 245 tgaataaatcaggtctagagagggtggaagttggttgcagcctttggatccatgagtgct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tgaataaatcaggtctagagagggtggaagttggttgcagcctttggatccatgagtgct 599

                                                                       
Query: 305 attctgctgaacatgcaagccaagagcacactacgtaaggtaagcctggtggcacaggtt 364
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gttctgctgaacatgcaagccaagagcacactacgtaaggtaagcctggtggcacaggtt 539

                                                                       
Query: 365 atgacaggctgtgtgagagatgaaagaatttcagtatttcatcaataaggtaggtcaagg 424
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 538 atgacaggctgtgtgagagatgaaagaatttcagtatttcatcaatgaggtaggtcaagg 479

                                                                       
Query: 425 attcagaagaaaagggtaaggtcacattgttgctaaaacaattgtgaatatctataagtg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 attcagaagaaaagggtaaggtcacattgttgctaaaacaattgtgaatatctataagtg 419

                                                                       
Query: 485 gaatgggacaagaatgttaggaaactatattggcaccatgaatgggctgttatgagcatt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gaatgggacaagaatgttaggaaactatattggcaccatgaatgggctgttatgagcatt 359

                                                                       
Query: 545 tagaagtagccaactagagtaacagtactcagacaaggaaggatggaagggtagcaacag 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tagaagtagccaactagagtaacagtactcagacaaggaaggatggaagggtagcaacag 299

               
Query: 605 caga 608
           ||||
Sbjct: 298 caga 295


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space:   596804
Effective search space used:   596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)