Query= MSMg01no437_n17.b1 MSMg01no437_n17.b1 CHROMAT_FILE:
MSMg01no437_n17.b1 PHD_FILE: MSMg01no437_n17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:24 2005
(554 letters)
>mm_chr16_3855397_3856350
Length = 954
Score = 1027 bits (531), Expect = 0.0
Identities = 546/551 (99%)
Strand = Plus / Plus
Query: 4 ggaattctgcctgttcttaaataagccattagctttaaaactgtgactagtgtgttcacg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgcctgttcttaaataagccattagctttaaaactgtgactagtgtgttcacg 263
Query: 64 gtgtttacaattggattatgggaagggttatacaattaagtgactccaggaaaattattg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtgtttacaattggattatgggaagggttatacaattaagtgactccaggaaaattattg 323
Query: 124 aaatagattaatttatgataggtaaattgtacctccatagccttttaaaataacagaata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaatagattaatttatgataggtaaattgtacctccatagccttttaaaataacagaata 383
Query: 184 tttatataaaatgttaagagttccagaagtgggtctaggaaccttcccatgccaaactct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttatataaaatgttaagagttccagaagtgggtctaggaaccttcccatgccaaactct 443
Query: 244 tgttttcttaaagtagaaagtagagcccagtcagtgttcaccctagggaaggcaccctct 303
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 444 tgttttcttaaagtagaaagtagagcccaatcagtaatcaccctagggaaggcaccctct 503
Query: 304 tcctccattccggcagatatgtgtaagtaggatgtggtggccattcttctgaaggcatca 363
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcctccatttcggcagatatgtgtaagtaggatgtggtggccattcttctgaaggcatca 563
Query: 364 atgccaagtcactgcctttatcttcaatattcagctgggccttacctcttccccagccca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atgccaagtcactgcctttatcttcaatattcagctgggccttacctcttccccagccca 623
Query: 424 cacaccactgctagccagagcctttatagtttatacacacagacacatacacacacacaa 483
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 624 cacaccactgctagccagagcctttatagtttatacacatagacacatacacacacacaa 683
Query: 484 ctttcctctaagccaccttcactgctgtcttgtaataacttcttagtcatgtctgaattt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctttcctctaagccaccttcactgctgtcttgtaataacttcttagtcatgtctgaattt 743
Query: 544 gttttctactg 554
|||||||||||
Sbjct: 744 gttttctactg 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_n17.g1 MSMg01no437_n17.g1 CHROMAT_FILE:
MSMg01no437_n17.g1 PHD_FILE: MSMg01no437_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:24 2005
(475 letters)
>mm_chr16_4032760_4033638
Length = 879
Score = 584 bits (302), Expect = e-171
Identities = 317/324 (97%), Gaps = 4/324 (1%)
Strand = Plus / Minus
Query: 156 gcttgggaggcaaaggaaagtggatctctataagtttgagaccagactgacctacagagt 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 gcttgggaggcaaaggaaagtggatctctataagtttgagaccagactgacctacagagt 820
Query: 216 gagtttcaggtgtccagggctacacagggaagccttgtctcaaaaaaagcaaacaaaatg 275
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 819 gagtttcaggtgtccagggctacacagggaaaccatgtctcaaaaaaagcaaacaaaatg 760
Query: 276 aagcaataatagtaatgtatgtgtgctaactttttcaaatgtctactataaattgtaagg 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 aagcaataatagtaatgtatgtgtgctaactttttcaaatgtctactataaattgtaagg 700
Query: 336 ccataaatcctgattgggttcgcccagctaatagacatccatctgtgggtgatttcct-- 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ccataaatcctgattgggttcgcccagctaatagacatccatctgtgggtgatttcctgt 640
Query: 394 --gtgacttactaccaaccttcgctaagttgtgtcactgagaaagcctggaagctgtgag 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gggtgacttactaccaaccttcgctaagttgtgtcactgagaaagcctggaagctgtgag 580
Query: 452 ctggcaagcaaggtgtggcttgga 475
||||| ||||||||||||||||||
Sbjct: 579 ctggcgagcaaggtgtggcttgga 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 879
Length adjustment: 10
Effective length of query: 465
Effective length of database: 869
Effective search space: 404085
Effective search space used: 404085
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
