Query= MSMg01no437_p24.b1 MSMg01no437_p24.b1 CHROMAT_FILE:
MSMg01no437_p24.b1 PHD_FILE: MSMg01no437_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:35 2005
(368 letters)
>mm_chr16_10940853_10941620
Length = 768
Score = 669 bits (346), Expect = 0.0
Identities = 361/366 (98%), Gaps = 3/366 (0%)
Strand = Plus / Minus
Query: 5 gaattcctt-aat-atttcttttatttgatgatctgttctgtgtttgactgtctaagctt 62
||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gaattccttaaataattt-ttttatttgatgatctgttctgtgtttgactgtctaagctt 699
Query: 63 atgcacgtgctcatgaggccagaggagggtgatgggtgtcctggaactggagttgcagta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 atgcacgtgctcatgaggccagaggagggtgatgggtgtcctggaactggagttgcagta 639
Query: 123 gtaaaccgcttaatgtgggtgctgggaactgacccaagcgctttttacagggatgttaat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gtaaaccgcttaatgtgggtgctgggaactgacccaagcgctttttacagggatgttaat 579
Query: 183 gttctcttaaccccttaatcacagaaccatccctctagtcccctgggggagatcagtttt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gttctcttaaccccttaatcacagaaccatccctctagtcccctgggggagatcagtttt 519
Query: 243 gataaaaagtggatgatatttaagaattttctcctagtaataaggagaggtttgcttttt 302
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 518 gataaaaagtggatgatatttaagaattttctcctaggaacaaggagaggtttgcttttt 459
Query: 303 agcctatggcttctctcctttgaacccaggtatcttagggtttccattgctgtgaagaaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agcctatggcttctctcctttgaacccaggtatcttagggtttccattgctgtgaagaaa 399
Query: 363 caccat 368
||||||
Sbjct: 398 caccat 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_p24.g1 MSMg01no437_p24.g1 CHROMAT_FILE:
MSMg01no437_p24.g1 PHD_FILE: MSMg01no437_p24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:35 2005
(416 letters)
>mm_chr16_10774021_10774836
Length = 816
Score = 781 bits (404), Expect = 0.0
Identities = 413/416 (99%)
Strand = Plus / Plus
Query: 1 aaggccagtctgagctatgtaaaaccagaccttttaccagtccaggaccttttccctcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggccagtctgagctatgtaaaaccagaccttttaccagtccaggaccttttccctcta 260
Query: 61 cccacaggatgcttaagcctgtttgggccaaatataagtgtctagacacctctctggaaa 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 261 cccacaggatgcttaagcctgtttgggccaaatataagtgtccagacacctctctgggaa 320
Query: 121 agtgttcaaggtattcagtttagcctcagtgttactgacaaagaaatgggcccatctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgttcaaggtattcagtttagcctcagtgttactgacaaagaaatgggcccatctccc 380
Query: 181 acccattccatccagcccaccagacaggtgaaacaaaatgaagcaaacgcatgaagaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acccattccatccagcccaccagacaggtgaaacaaaatgaagcaaacgcatgaagaaca 440
Query: 241 tcccatttgtccaacctgggtccactctgacccggggcatgagaactccggttggcgtca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 tcccatttgtccaacctgggtccactctgacccggggcatgagaactccggttggcatca 500
Query: 301 ttcaggaccatgacagcacaggtagcaagtgttctacagtgctaaatgccaggtgatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcaggaccatgacagcacaggtagcaagtgttctacagtgctaaatgccaggtgatgat 560
Query: 361 gacacagtactggagcctaagtttctgctatccaagcttcccatacttcctaggta 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacacagtactggagcctaagtttctgctatccaagcttcccatacttcctaggta 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
