Query= MSMg01no439_n08.b1 MSMg01no439_n08.b1 CHROMAT_FILE:
MSMg01no439_n08.b1 PHD_FILE: MSMg01no439_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:04 2005
(249 letters)
>mm_chr16_17879786_17880434
Length = 649
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%)
Strand = Plus / Plus
Query: 1 ctgggcatggcagcaacagggaacagtaaggacagatgatgatggttaggaggaaaatgg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 ctgggcatggcagcaacagggaacagtaaggacagacgatgatggttaggaggaaaatgg 260
Query: 61 gctgagactcaaggtggaaaggtacaagacgagacagagacaaaggtccccactagagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgagactcaaggtggaaaggtacaagacgagacagagacaaaggtccccactagagca 320
Query: 121 gcacatagcaaagtattaatgtcaggctatctagactccaaatatttgctctactttaca 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 gcacatagcaaagtattaatgtcaggctacctagactccaaatatttgctctactttaca 380
Query: 181 aggtgaagctctgaagctatgtaaccttggccaagtaatgtattctaagaccctgctgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtgaagctctgaagctatgtaaccttggccaagtaatgtattctaagaccctgctgtc 440
Query: 241 tatagaaca 249
|||||||||
Sbjct: 441 tatagaaca 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no439_n08.g1 MSMg01no439_n08.g1 CHROMAT_FILE:
MSMg01no439_n08.g1 PHD_FILE: MSMg01no439_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:04 2005
(282 letters)
>mm_chr16_18039652_18040333
Length = 682
Score = 478 bits (247), Expect = e-139
Identities = 273/287 (95%), Gaps = 10/287 (3%)
Strand = Plus / Minus
Query: 1 actctgccagatgcacagcaaagaaagaacaggatacaaccactggcaggagcatgcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 actctgccagatgcacagcaaagaaagaacaggatacaaccactggcaggagcatgcctc 423
Query: 61 cctggccagctgtcctatgctgggatccagaatcacagagacacatgatacatgagggag 120
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 422 cccggccagctgtcctatgctgggatccagaatcgcagagacacatgatacatgagggag 363
Query: 121 gctggacagatgtgttggcagatggatgcgttagcagaggacgggtgttaatttcgagtc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 362 gctggacagatgtgttggcagatggatgcgttagcagaggacgggtgttaatttggagtc 303
Query: 181 ctggcgtttaaataagttaatgatctcatagaaggtccaaccaaaaagatgcacaaacca 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctggtgtttaaataagttaatgatctcatagaaggtccaaccaaaaagatgcacaaacca 243
Query: 241 a-----ttttttctattcaagaccttgataaagcagtctccaaaatg 282
| ||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggaac-----tctattcaagaccttgataaagcagtctccaaaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
