Query= MSMg01no440_a15.b1 MSMg01no440_a15.b1 CHROMAT_FILE:
MSMg01no440_a15.b1 PHD_FILE: MSMg01no440_a15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:19 2005
(499 letters)
>mm_chr16_35911277_35912180
Length = 904
Score = 897 bits (464), Expect = 0.0
Identities = 492/504 (97%), Gaps = 5/504 (0%)
Strand = Plus / Minus
Query: 1 catagttttgaatatttcttcagaacttgactgcctgaccttgagagtcacctctgtttg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 704 catagttttgaatatttcttcagaacttggctgcctgaccttgagagtcacctctgtttg 645
Query: 61 gatagcactgagattaatgggaagggggctctactgagaaatttcaggctttctgattat 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gatagcactgagattagtgggaagggggctctactgagaaatttcaggctttctgattat 585
Query: 121 gagctgctggaaaccttctttgcttttgatgtagctacagagatagcagagaggaggcag 180
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||
Sbjct: 584 gagctgctggaaaccttctttgcttttgctgtagctacggagatagcagagagggggcag 525
Query: 181 ccagctgctttctttacgttctctaaagaatagagtccttggactatcttggaatgtggg 240
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 524 ccagctgctttctttacgttctctgaagagtagagtccttggactatcttggaatgtggg 465
Query: 241 cttaggaccttgtcctgagatcagcaggttgaacagttgaatcttatctttttacccaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cttaggaccttgtcctgagatcagcaggttgaacagttgaatcttatctttttacccaga 405
Query: 301 g-----ctgactcatacaaatcaaactcaagagacttactttatgaagctggaatcgtaa 355
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gttgatctgactcatacaaatcaaactcaagagacttactttatgaagctggaatcgtaa 345
Query: 356 ttacttaatttgcagtgagaaagataattgtcatggttactggtaattgtgagtcaactg 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ttacttaatttgcagtgagaaagataattgtcatggttactggtaattgtgagtcaactg 285
Query: 416 acttttatgagggtcctggagaatataatcagacctggaaaaacaatggatgccataaca 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 acttttatgagggtcctggagaatataatcagacctggaaaaacaatggatgccataaca 225
Query: 476 gcataacattacagctaatttatt 499
||||||||||||||||||||||||
Sbjct: 224 gcataacattacagctaatttatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 904
Length adjustment: 10
Effective length of query: 489
Effective length of database: 894
Effective search space: 437166
Effective search space used: 437166
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_a15.g1 MSMg01no440_a15.g1 CHROMAT_FILE:
MSMg01no440_a15.g1 PHD_FILE: MSMg01no440_a15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:19 2005
(384 letters)
>mm_chr16_35728744_35729527
Length = 784
Score = 611 bits (316), Expect = e-179
Identities = 367/384 (95%), Gaps = 1/384 (0%)
Strand = Plus / Plus
Query: 1 aaagccagacctgggcaacttagtgaaacaactgtttcaagggggctgagatttcacgac 60
||||||||| |||||||||||||||| | ||||||||||||||||||||||||| |||
Sbjct: 202 aaagccagaactgggcaacttagtgaggc-cctgtttcaagggggctgagatttcatgac 260
Query: 61 agtagtagagcccttgcctagcctgtgtgaggccctgaagagattttggggtgctgtggt 120
||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 261 agtagtagagcccgtgcctagcctgtgtgaggccctgaagaggttttggggtgctgtgat 320
Query: 121 cctggctccataccacaattctacctctgttgtctttgctctactttcaactctgtggca 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctggctccataccacaattccacctctgttgtctttgctctactttcaactctgtggca 380
Query: 181 ggctaccaactatgccccttggagctctaggtatgcaggccatttctcagccttcaggag 240
|||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 ggctaccaactaagccacttggagctctaggtatgcaggccatttttcagccttcaggag 440
Query: 241 caggaaggtttgtccccatttagggctactagcaagcctcctcctcattcctcttttcta 300
|||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggaaggaatgaccctatttagggctactagcaagcctcctcctcattcctcttttcta 500
Query: 301 tttttctgcaagaagggtgggcaagagacttgaacaggcagtcacaaaataggacattca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttttctgcaagaagggtgggcaagagacttgaacaggcagtcacaaaataggacattca 560
Query: 361 aatatccgctaacagttgaaaaag 384
||||||||||||||||||||||||
Sbjct: 561 aatatccgctaacagttgaaaaag 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
