Query= MSMg01no441_o17.b1 MSMg01no441_o17.b1 CHROMAT_FILE:
MSMg01no441_o17.b1 PHD_FILE: MSMg01no441_o17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:53 2005
(495 letters)
>mm_chr16_38322042_38322935
Length = 894
Score = 919 bits (475), Expect = 0.0
Identities = 490/495 (98%), Gaps = 1/495 (0%)
Strand = Plus / Plus
Query: 1 taagtaagattttaatttttgaattgattttactttttctgaaaaacattttttaatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 taagtaagattttaatttttgaattgattttactttttctgaaaaacattttt-aatgat 259
Query: 61 cttttaaaaatgtgattgagttgtttagagtacatacatatcaaccgctgatttgagcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cttttaaaaatgtgattgagttgtttagagtacatacatatcaaccgctgatttgagcac 319
Query: 121 attagtagtttaattcttatttttttcccatgaatttgaggcagctggaaagctttcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 attagtagtttaattcttatttttttcccatgaatttgaggcagctggaaagctttcaga 379
Query: 181 gatggtttttaaattctttctttttttaatcagatctttgggaatttagaatagcattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gatggtttttaaattctttctttttttaatcagatctttgggaatttagaatagcattgt 439
Query: 241 ttgattatattcttctccctcctcaaccttccattttcctccccacccacccgagtgtcc 300
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttgattatattcacctccctcctcaaccttccattttcctccccacccacccgagtgtcc 499
Query: 301 tccttttgtttgtttgttttttacccataatgccccatttgtgttgtccacaacacatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tccttttgtttgtttgttttttacccataatgccccatttgtgttgtccacaacacatac 559
Query: 361 tcttgggtatgtggccttccactggggcgtggcaactaccaggctcagcactcataaaag 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 560 tcttgggtatgtggccttccactggggtgtggcaactaccaggctcagcactcataaaag 619
Query: 421 gtcatagaatgtttaaaaaattaattactgtcttagtcagggtttctattcctggacaaa 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 620 gtcatagaatgtttaaaaaattaattacggtcttagtcagggtttctattcctggacaaa 679
Query: 481 acatcatgaccaaga 495
|||||||||||||||
Sbjct: 680 acatcatgaccaaga 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 894
Length adjustment: 10
Effective length of query: 485
Effective length of database: 884
Effective search space: 428740
Effective search space used: 428740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_o17.g1 MSMg01no441_o17.g1 CHROMAT_FILE:
MSMg01no441_o17.g1 PHD_FILE: MSMg01no441_o17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:53 2005
(505 letters)
>mm_chr16_38492633_38493537
Length = 905
Score = 924 bits (478), Expect = 0.0
Identities = 502/518 (96%), Gaps = 13/518 (2%)
Strand = Plus / Minus
Query: 1 actgtgtagatcaggctagccttgaacttccagagat-------------cctcctgagt 47
||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 787 actgtgtagatcaggctggccttgaacttccagagatcctcctgcctctgcctcctgagt 728
Query: 48 gctggcatcacaggtctcgaactgtttaccaccatattcagttcagcctcagatttcaaa 107
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gctggcatcacaggtctcgagctgtttaccaccatattcagttcagcctcagatttcaaa 668
Query: 108 gctccattgttctctttcatagaagacaaagctgatacacactgaccacagttgtcacag 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gctccattgttctctttcatagaagacaaagctgatacacactgaccacagttgtcacag 608
Query: 168 aagttaacacagcattcactccattaactgacagagcatttaggactgcagcagtaactg 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aagttaacacagcattcactccattaactgacagagcatttaggactgcagcagtaactg 548
Query: 228 acctactttatgtgtcgtcataggactaaacccaaatcttaatgttttccactctttggc 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 acctactttatgtgtcgtcataggactaaacccaaatcttaatgttttccactctttggc 488
Query: 288 atcgagttatttcatatgaagtgactggaagccacatcctgaggaatgatggagagcgat 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atcgagttatttcatatgaagtgactggaagccacatcctgaggaatgatggagagcgat 428
Query: 348 ggatactttaactccagagagtcaaaagctttgaagcttctcctgcaggccctgggttct 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ggatactttaactccagagagtcaaaagctttgaagcttctcctgcaggccctgggttct 368
Query: 408 cttctgagattttggatgggaaacaaacacgacaggatagttttaaatgaagcttggccc 467
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cttctgagattttgaatgggaaacaaacacgacaggatagttttaaatgaagcttggccc 308
Query: 468 agtgatttatcagtagcatgagtcattaagagagaact 505
||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agtgatttatcagtagcatgagtcattaagagagaact 270
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
