MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-442A20
Chromosome	16 (Build37)
Map Location	92,872,585 - 92,872,782
singlet/doublet	singlet
Overlap gene	EG666023
Upstream gene	Itsn1, Atp5o, Mrps6, Slc5a3, Kcne2, 1190017O12Rik, 4930563D23Rik, Kcne1, Dscr1, 2410124H12Rik, Clic6, Runx1
Downstream gene	LOC100040747, Setd4, LOC670912, Cbr1, EG435489, Cbr3, Dopey2, Morc3
Link	Open Mouse BAC browser

Click to get alignment info.

name	Itsn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16443 MGI:1338069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp5o (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28080 MGI:106341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrps6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:121022 MGI:2153111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc5a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53881 MGI:1858226
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcne2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246133 MGI:1891123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1190017O12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68936 MGI:1916186
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930563D23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75328 MGI:1922578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcne1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16509 MGI:96673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dscr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54720 MGI:1890564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2410124H12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76785 MGI:1924035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Clic6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209195 MGI:2146607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Runx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12394 MGI:99852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666023 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666023 MGI:3648339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040747 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Setd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224440 MGI:2136890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC670912 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	Cbr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12408 MGI:88284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG435489 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435489 MGI:3646098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 8 Proteins

name	Cbr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109857 MGI:1309992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dopey2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70028 MGI:1917278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Morc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338467 MGI:2136841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itsn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134288903 GeneID:16443 MGI:1338069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : intersectin 1 (SH3 domain protein 1A) transcript_id : NM_010587.2

name	Atp5o (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129975 GeneID:28080 MGI:106341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit transcript_id : NM_138597.2

name	Mrps6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956243 GeneID:121022 MGI:2153111
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein S6 transcript_id : NM_080456.1

name	Slc5a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8394315 GeneID:53881 MGI:1858226
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 5 (inositol transporters), member 3 transcript_id : NM_017391.1

name	Kcne2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374181 GeneID:246133 MGI:1891123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, Isk-related subfamily, gene 2 transcript_id : NM_134110.2

name	1190017O12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124358928 GeneID:68936 MGI:1916186
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1190017O12 gene transcript_id : NM_138743.2

name	4930563D23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113461978 GeneID:75328 MGI:1922578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930563D23 gene transcript_id : NM_029252.2

name	Kcne1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227204 GeneID:16509 MGI:96673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, Isk-related subfamily, member 1 transcript_id : NM_008424.3

name	Dscr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125656175 GeneID:54720 MGI:1890564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region homolog 1 (human) transcript_id : NM_001081549.1

name	Dscr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125656174 GeneID:54720 MGI:1890564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region homolog 1 (human) transcript_id : NM_019466.3

name	2410124H12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268205 GeneID:76785 MGI:1924035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 2410124H12 gene transcript_id : XM_001475819.1

name	Clic6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366821 GeneID:209195 MGI:2146607
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chloride intracellular channel 6 transcript_id : NM_172469.2

name	Runx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753297 GeneID:12394 MGI:99852
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : runt related transcription factor 1 transcript_id : NM_009821.1

name	EG666023 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400741 GeneID:666023 MGI:3648339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG666023 transcript_id : XM_981017.1

name	LOC100040747 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268198 GeneID:100040747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040747 transcript_id : XM_001475175.1

name	Setd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803504 GeneID:224440 MGI:2136890
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain containing 4 transcript_id : NM_145482.2

name	LOC670912 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268200 GeneID:670912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical LOC670912 transcript_id : XM_001475221.1

name	Cbr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113680351 GeneID:12408 MGI:88284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonyl reductase 1 transcript_id : NM_007620.2

name	EG435489 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400743 GeneID:435489 MGI:3646098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 8 Proteins product : predicted gene, EG435489 transcript_id : XM_487442.3

name	Cbr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982073 GeneID:109857 MGI:1309992
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonyl reductase 3 transcript_id : NM_173047.2

name	Dopey2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62243807 GeneID:70028 MGI:1917278
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dopey family member 2 transcript_id : NM_027293.1

name	Dopey2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62243773 GeneID:70028 MGI:1917278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dopey family member 2 transcript_id : NM_026700.2

name	Morc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803512 GeneID:338467 MGI:2136841
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microrchidia 3 transcript_id : NM_001045529.2

name	Itsn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134288904 GeneID:16443 MGI:1338069
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IDA] codon_start : 1 note : Eh domain, SH3 domain regulator of endocytosis 1; Intersectin-L; intersectin (SH3 domain protein 1A) product : intersectin 1 protein_id : NP_034717.2

name	Atp5o (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20070412 CCDS:CCDS28331.1 GeneID:28080 MGI:106341
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit protein_id : NP_613063.1

name	Mrps6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956244 CCDS:CCDS28332.1 GeneID:121022 MGI:2153111
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : mitochondrial ribosomal protein S6 protein_id : NP_536704.1

name	Slc5a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394316 GeneID:53881 MGI:1858226
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0015798 - myo-inositol transport [Evidence IMP]; GO:0007422 - peripheral nervous system development [Evidence IMP]; GO:0043576 - regulation of respiratory gaseous exchange [Evidence IMP]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : sodium myo-inositol transporter 1; Na(+)/myo-inositol cotransporter; solute carrier family 5, member alpha 3; solute carrier family 5, member 3 product : solute carrier family 5 (inositol transporters), member 3 protein_id : NP_059087.1

name	Kcne2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19882205 CCDS:CCDS28333.1 GeneID:246133 MGI:1891123
definition	GO_function : GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : minK-related peptide 1; minimum potassium ion channel related peptide 1 product : potassium voltage-gated channel, Isk-related subfamily, gene 2 protein_id : NP_598871.1

name	1190017O12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20270271 GeneID:68936 MGI:1916186
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : hypothetical protein LOC68936 protein_id : NP_620082.1

name	4930563D23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794180 CCDS:CCDS28335.1 GeneID:75328 MGI:1922578
definition	codon_start : 1 product : hypothetical protein LOC75328 protein_id : NP_083528.1

name	Kcne1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680528 CCDS:CCDS28336.1 GeneID:16509 MGI:96673
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0002070 - epithelial cell maturation [Evidence IMP]; GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : potassium voltage-gated channel, Isk-related subfamily, member 1 protein_id : NP_032450.1

name	Dscr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125656176 GeneID:54720 MGI:1890564
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0019722 - calcium-mediated signaling [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; myocyte-enriched calcineurin interactin protein 1; calcineurin inhibitor; calcipressin 1 product : calcipressin 1 isoform 1 protein_id : NP_001075018.1

name	Dscr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542574 CCDS:CCDS28337.1 GeneID:54720 MGI:1890564
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0019722 - calcium-mediated signaling [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; myocyte-enriched calcineurin interactin protein 1; calcineurin inhibitor; calcipressin 1 product : calcipressin 1 isoform 2 protein_id : NP_062339.2

name	2410124H12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268206 GeneID:76785 MGI:1924035
definition	codon_start : 1 product : hypothetical protein LOC76785 protein_id : XP_001475869.1

name	Clic6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369633 CCDS:CCDS28338.1 GeneID:209195 MGI:2146607
definition	GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : chloride intracellular channel 6 protein_id : NP_766057.1

name	Runx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753298 CCDS:CCDS28339.1 GeneID:12394 MGI:99852
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0048266 - behavioral response to pain [Evidence IMP]; GO:0030097 - hemopoiesis [Evidence TAS]; GO:0048666 - neuron development [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0045766 - positive regulation of angiogenesis [Evidence IMP]; GO:0030854 - positive regulation of granulocyte differentiation [Evidence ISS]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation function : transcription factor note : core binding factor alpha 2; runt domain, alpha subunit 2 product : runt related transcription factor 1 protein_id : NP_033951.1

name	EG666023 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400742 GeneID:666023 MGI:3648339
definition	codon_start : 1 product : hypothetical protein protein_id : XP_986111.1

name	LOC100040747 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268199 GeneID:100040747
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475225.1

name	Setd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703952 CCDS:CCDS28340.1 GeneID:224440 MGI:2136890
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : SET domain containing 4 protein_id : NP_663457.1

name	LOC670912 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268201 GeneID:670912
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475271.1

name	Cbr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113680352 CCDS:CCDS28341.1 GeneID:12408 MGI:88284
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004090 - carbonyl reductase (NADPH) activity [Evidence TAS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : carbonyl reductase 1 protein_id : NP_031646.2

name	EG435489 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51830180 GeneID:435489 MGI:3646098
definition	codon_start : 1 product : similar to Carbonyl reductase 1 protein_id : XP_487442.1

name	Cbr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27413160 CCDS:CCDS28342.1 GeneID:109857 MGI:1309992
definition	codon_start : 1 product : carbonyl reductase 3 protein_id : NP_766635.1

name	Dopey2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62243808 CCDS:CCDS28343.1 GeneID:70028 MGI:1917278
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : pad-1-like isoform 1 protein_id : NP_081569.1

name	Dopey2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15022807 GeneID:70028 MGI:1917278
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : pad-1-like isoform 2 protein_id : NP_080976.1

name	Morc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865911 GeneID:338467 MGI:2136841
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : zinc finger, CW-type with coiled-coil domain 3 product : microrchidia 3 protein_id : NP_001038994.1

clone name	MSMg01-215H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388H22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-266F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382G16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-291M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119B23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-442A20.T7 (MSMg01no442_a20.b1)	MSMg01-442A20.TJ (MSMg01no442_a20.g1)
ACC	AG531789	AG531790
length	1,171	879
length of high quality (start - end)	---	198 (73 - 270)
definition	CHROMAT_FILE: MSMg01no442_a20.b1 PHD_FILE: MSMg01no442_a20.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:09:03 2005	CHROMAT_FILE: MSMg01no442_a20.g1 PHD_FILE: MSMg01no442_a20.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:09:03 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CGTCGCCCCTGCTGGTCCCAGATATCACTCTATTATTTCATATAGGATCC CGTGTCAACTCCCTCTCTTTTTTCATAGCCGCGTCTTTCTCACTTGTGAA CCGCACATCTACTCCCCTCTTCCCTGTCTTCACCCATTGAGACTATAAGG ACTAGCGCTTATCAATCTTTTTTACTGTCCCAGGTCTCTCCCTCCTAGAA GTGTACACTTACCAATATTACCAATGTATTTACTTCTTTTTATGTCGAGG GAACAACATAATATACCCGCCGTAGCGTCACAGCTATTTTGCTCTTAACT CATCGCTTATTCGCCGCCGCACCATTTCTCGCATTCTATCTTTCGTTCGC GCGCTCGCCCCGCCTCTATCCTGCTGATGTTCCACACATATAACGTATGT TACTATATTTTATTCCATGGCACCTTCTACTTCCGTCCGTCTGTTGTTGG TTTCCGTTATGTTTACGCCCTCTGCTCAATTCCTCCTCATCTTGCTTCCT CTTTTCTTCTCCCCCTCCCCCTCTTTCTCTCTTTTTCTACTCTCCGTCGC TCTCTCTTTTTCTTTGTCTCTGCCCCTATATATTTCTCCCCCTCCATTCT CTCTTGTATATTTCTCTTCTCTCACCCTATTTTATTTAACCCTTCTTCCG ATACTTCCATTCGATCTCATGCCCTCTGATTTATTTGCNACCCCCTACTC TTCCTCTTGCTCACCACCATCCTTAATGTATGACGTTTACTCATATCTAC ACCCATCTACTGTCTATCCTGCTTTTAGCAATACGCCGCTCCTTGCTCGC TCTCTTTTATTGATCTGCGGCATTGATGGTTACTCGCACTTCTAACCCAT ATCACTACGTTCAATGTTCCCATCCCACTAAATCTCTCCACTCACCACCA TCTCACTCACTTGTCATATATCAGATTTACGTCACATGACATCATTACGC CACCACCATCTCACCGTGCCCCGCTTTATTATATTTATACAGATTTCGCT TGTCTGTGTGCACCCTCACCACTCACACACCTCTATGTCCACTATCTGTA TATAATTTATATTTCGCCTCGCCCACCACGTCCTCTATCCTCTATTCTTC TTTCTCTCCCTCTCCCCAACCTTTATACTTATATATCTACTCATCCTTCT ATGTTCTCATATCACCTCTTG	CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXACTGGGCCCGTGTGGAGTTTCACAAAAG AGTGTGAGAATGGAAAGAGTAAAGGCACGCGTGGAAGAGGTGGGGTGCAG GAAGAAAGCATTGCAGTGAGGCATTTGGGTGGCTTCTGGAGAGGGTGGGG CATGCGATGCACTTGGTGGTGCCCTTGATCCGGTGCCTGATAGTCCCTTG ATTTTTGTGCTCTGAGATGGGGCTCTCATGGTCCCGAGTGTGGTCCAGTG CGGGCGTGGTAACCCCTTTTTTTCTTTGCCTGTCACTCTGCCCTTCATTC AGCCCTGCTTTTCCGCCCCTCCGGCTCACAGTTGAGGTTCTTTTGTTGCT GCTGATAACTGACGCCCCCCCCTGTTTTTTTTTCTCTCCTCCACCCTTCT CTCTTTTTTCTTCTCTTCTTCCCTCTTCTTCCCCCCCTTTTTTCTTCTTC CTCTCATTTCTCTTCTTCTCTCTCTTCCTCCCTCCTTTTCCCCCTTTCTT TTTCTTCCCCCTCTTCCTTCTCTTTTTTTCCCCCTCTCCTTCCTCTCTCT CCCTCTTTTCCCTTTTTTTTCCCCTCCCCGTTTGTTTCTTTTTCCCCCCC ACTTTTCTCCTCTCTTCTTTCTTTCTCTTCCCTCCCCCCCCTCTTCTTCT TCTTTCTCTCTCTTCCTTCCTTTCCCTCTTTCTTTTTTTTTCTTTCTCTC CCATTTTTTCCTTCTTTCACCCCCTACTTCCTTTTTTTCTTCCCCTCTAC CTCCTTTTTTTTTTTCCTCCCGCCTCTTCTTTCACCCTCTCTCCTTTCTC ACTTCCTCCTTTTCTTCTTCATCTTCTCG
quality values	Open. Hide. 8 8 8 8 8 10 13 15 12 10 6 6 6 8 6 6 6 6 11 9 6 6 8 8 8 7 9 9 9 13 9 9 9 9 9 9 9 9 9 7 8 8 8 8 8 10 10 11 10 10 9 9 10 9 10 8 8 6 6 8 7 8 8 8 8 8 10 15 14 14 12 8 6 6 6 8 8 8 8 6 6 10 8 10 9 8 8 8 15 12 13 12 8 8 6 6 6 6 8 8 8 8 8 9 10 8 8 6 8 6 6 8 8 12 14 11 10 10 10 10 10 8 8 10 12 11 10 9 9 10 12 9 8 8 8 8 6 7 7 12 12 14 14 12 13 7 9 10 8 8 7 7 8 8 8 8 8 8 8 12 6 6 6 6 7 8 8 9 8 13 11 11 11 11 11 11 11 12 13 8 9 7 10 8 10 8 8 9 7 12 10 10 12 15 15 14 10 8 7 6 6 6 9 9 9 9 9 9 10 15 12 10 8 8 8 8 8 8 13 6 6 8 8 6 8 8 8 12 16 16 11 10 10 10 10 10 10 11 16 15 11 6 6 6 6 8 8 8 8 8 11 8 8 8 6 8 7 6 8 8 8 8 12 15 12 9 8 12 11 10 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 10 6 6 6 8 7 8 10 8 9 9 10 10 8 6 6 6 8 10 9 8 8 8 8 8 10 9 9 10 9 9 9 10 8 8 9 9 10 8 10 10 10 10 10 10 10 6 6 6 6 8 8 8 7 7 9 6 10 6 9 9 10 9 8 8 8 8 8 8 8 8 8 9 9 8 8 19 10 8 8 8 8 8 8 9 9 8 8 8 8 8 8 10 10 10 8 6 6 6 8 8 8 8 9 9 9 9 8 8 8 8 8 8 8 8 8 8 10 8 10 10 8 8 8 8 8 8 9 10 10 8 8 6 6 8 6 6 8 10 10 10 8 8 8 8 8 8 8 9 10 9 9 10 9 8 8 8 6 8 13 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 11 15 10 10 10 8 8 8 10 8 8 8 8 8 8 15 15 15 19 11 11 11 9 9 8 8 8 8 9 9 9 9 8 10 12 7 6 6 6 8 8 8 8 8 9 10 8 6 6 7 13 15 14 14 14 12 12 12 16 8 8 6 6 8 7 12 13 14 13 10 8 8 8 8 8 9 9 10 10 10 12 12 10 8 6 6 6 8 6 6 10 8 10 8 10 10 8 8 9 9 10 10 10 10 10 10 10 8 8 6 6 6 6 10 9 9 13 9 10 8 12 11 18 11 10 8 8 6 6 8 8 8 8 8 8 10 9 8 8 8 8 8 8 9 9 12 11 10 9 9 10 11 9 11 13 15 15 10 12 10 14 11 11 12 12 10 7 7 8 8 8 6 6 8 8 9 9 9 9 10 10 10 11 8 8 8 8 8 8 6 8 6 6 8 6 8 8 8 8 8 10 6 8 6 6 7 6 7 7 8 8 8 8 8 8 8 8 8 7 7 3 0 3 8 13 15 21 15 10 10 15 10 10 8 8 8 10 10 10 10 9 9 8 12 7 6 8 8 10 10 9 10 10 8 8 8 12 12 8 8 9 8 8 8 8 6 6 6 8 8 8 8 10 10 10 8 8 10 10 8 8 8 8 11 12 10 8 6 6 8 8 6 6 6 6 6 11 10 10 10 13 8 8 8 8 8 8 8 8 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 9 12 9 9 8 8 8 8 6 6 6 8 8 8 8 8 6 6 6 6 6 8 6 6 6 8 8 8 8 8 8 8 8 6 6 8 10 8 8 8 6 6 6 8 8 10 10 8 8 8 11 13 13 12 9 8 8 8 8 8 8 9 8 8 6 6 8 8 8 8 8 13 13 13 10 10 10 7 7 8 8 9 10 12 13 8 8 8 8 8 8 8 7 7 8 10 12 10 8 8 7 6 8 8 6 6 6 6 6 10 10 10 8 10 10 8 8 8 8 8 8 8 8 8 10 8 6 6 6 6 6 8 8 10 10 8 11 8 10 10 10 9 10 8 8 6 8 6 6 8 8 10 10 6 6 6 6 8 6 6 6 6 8 8 8 8 8 8 7 10 6 6 6 6 8 8 8 8 6 7 6 6 6 7 7 7 8 6 10 8 8 7 7 8 6 6 6 6 8 8 8 8 12 10 9 9 9 9 9 10 10 8 8 8 8 8 6 6 6 6 8 10 8 10 8 8 8 8 8 6 6 6 8 8 10 10 10 13 15 8 8 6 6 6 10 6 6 10 7 13 18 12 12 13 8 11 8 8 8 8 8 8 10 8 6 6 7 6 6 6 6 8 6 13 8 8 8 8 8 8 11 10 8 8 6 6 6 6 10 9 11 12 14 8 9 9 8 8 7 6 10 8 6 6 7 6 8 10 10 10 10 10 10 15 14 8 8 8 10 12 9 8 12 8 8 8 8 13 13 20 22 24 17 20 19 19 15 15 11 14 11 11 8 8 8 8 8 8 10 12 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 10 10 9 9	Open. Hide. 7 7 15 10 16 11 9 9 23 12 17 10 10 10 14 27 32 37 37 37 37 37 39 37 37 44 44 25 25 11 11 9 8 8 8 8 8 8 10 12 16 19 26 37 44 30 23 16 16 20 27 23 50 42 41 25 19 9 10 10 9 9 9 9 9 9 13 12 19 19 29 29 33 31 30 47 53 57 57 59 59 59 59 59 59 57 53 53 53 53 48 48 42 42 42 48 54 68 68 68 68 68 68 68 68 68 68 68 68 54 54 54 54 48 48 48 48 57 43 39 37 37 39 47 47 48 54 54 59 59 59 57 54 54 54 54 57 57 57 57 57 57 47 54 54 57 57 57 57 57 57 57 57 57 57 57 57 50 47 47 57 57 57 47 47 57 50 54 57 57 57 48 48 48 57 48 57 57 57 57 48 48 54 59 59 59 59 57 57 54 54 48 57 57 57 57 57 43 43 43 44 48 46 48 47 47 47 42 42 37 39 39 59 59 57 46 46 33 33 30 30 41 40 48 48 43 43 43 43 43 47 43 43 36 36 43 43 29 27 11 11 11 23 27 36 39 37 34 32 18 13 10 12 12 11 13 15 15 30 30 39 39 31 31 20 20 20 30 24 18 14 13 13 15 23 24 14 12 12 10 10 10 13 13 12 13 15 18 18 15 24 18 23 18 21 10 8 8 8 10 8 8 12 24 12 12 12 12 12 13 10 9 9 9 12 15 13 7 7 8 7 7 6 6 6 8 10 11 11 17 17 19 18 9 9 9 9 10 10 11 16 21 24 15 15 11 11 11 12 10 10 10 10 10 9 12 10 9 9 15 17 19 12 14 16 14 13 10 10 9 9 10 9 11 14 15 10 10 10 13 9 9 9 10 8 11 10 10 8 8 10 11 11 12 6 6 6 6 8 8 8 8 8 8 10 8 8 8 8 10 8 8 8 8 13 15 22 24 10 8 8 8 8 8 8 8 8 8 13 10 20 19 15 18 18 15 10 8 8 8 8 7 8 7 10 10 10 9 9 9 10 12 11 10 8 8 8 8 8 10 9 11 16 17 10 10 9 8 8 14 17 15 15 9 10 8 8 12 8 10 10 12 12 16 17 16 10 10 11 18 15 11 6 6 8 8 10 8 8 8 8 13 10 9 9 11 11 13 11 11 11 9 8 8 8 8 6 6 8 8 8 13 13 8 9 9 12 12 8 8 8 10 10 10 13 18 17 10 9 9 12 12 15 8 9 9 12 10 12 13 10 10 17 13 13 16 13 23 16 20 9 8 8 8 8 8 13 23 15 15 9 9 9 13 13 10 8 12 8 10 11 16 11 17 10 8 8 8 8 15 8 8 8 8 9 8 10 6 6 8 10 15 10 10 10 10 10 8 10 8 8 8 10 10 10 10 14 19 13 13 10 12 11 15 11 11 11 11 9 9 9 8 6 6 6 8 10 15 18 14 16 12 10 8 8 9 8 8 7 8 8 8 10 8 8 8 12 15 8 10 11 9 9 8 8 8 8 8 12 10 6 6 8 15 15 13 13 8 8 9 10 19 19 24 17 22 14 15 11 10 10 10 10 9 23 21 25 25 14 12 9 9 8 8 8 8 8 10 19 15 11 8 8 11 13 8 8 8 8 8 8 11 12 8 8 6 6 13 8 11 8 8 9 21 15 17 13 14 14 15 8 7 7 10 10 10 10 10 15 10 8 8 6 6 10 10 12 13 11 13 14 8 8 8 8 8 12 11 9 9 13 15 16 8 8 6 6 8 8 10 8 10 10 10 19 16 15 9 8 8 8 11 12 18 11 15 9 9 9 11 17 17 19 13 13 19 19 18 18 15 15 24 19 27 13 8 8 7 7 15 9 9 10 13 9 8 8 8 8 9 13 8 6 6 6 8 8 8 13 10 10 11 8 8 12 8 8 6 7 6 6 8 8 8 8 8 8 15 13 13 12 12 12 13 20 20 8 8 10 8 6 7 10 8 8 8 13 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no442_a20.g1 MSMg01no442_a20.g1 CHROMAT_FILE:
MSMg01no442_a20.g1 PHD_FILE: MSMg01no442_a20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:03 2005
         (198 letters)



>mm_chr16_92872385_92872982
          Length = 598

 Score =  344 bits (178), Expect = 2e-99
 Identities = 193/202 (95%), Gaps = 8/202 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgggcccgtgtggagtttcacaaaagagtgtgagaatggaaagagtaaaggcacgcgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 actgggcccgtgtggagtttcacaaaagagtgtgagaatggaaagagtaaaggcacgcgt 339

                                                                       
Query: 61  ggaagaggtggggtgcaggaagaaagcattgcagtgaggcatttgggtggcttctggaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ggaagaggtggggtgcaggaagaaagcattgcagtgaggcatttgggtggcttctggaga 279

                                                                       
Query: 121 gggtggggcatgcgatgcacttggtggtgcccttgatccggtgcctgatagtcccttga- 179
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| 
Sbjct: 278 gggtggggcatgcgatgcacttggtggtgcccttgatccggtgcctgagagtcccttgaa 219

                                 
Query: 180 ---tttttgtgctctgagatgg 198
              |    ||||||||||||||
Sbjct: 218 cact----gtgctctgagatgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 598
Length adjustment: 8
Effective length of query: 190
Effective length of database: 590
Effective search space:   112100
Effective search space used:   112100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information