Query= MSMg01no442_j07.b1 MSMg01no442_j07.b1 CHROMAT_FILE:
MSMg01no442_j07.b1 PHD_FILE: MSMg01no442_j07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:48 2005
(317 letters)
>mm_chr16_97990838_97991555
Length = 718
Score = 571 bits (295), Expect = e-167
Identities = 307/311 (98%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 6 gaattctctgttttccccttccca-aagcctaggctgtcctcttctgcctggatggctct 64
||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctctgtgctgcccttcccacaagcctaggctgtcctcttctgcctggatggctct 265
Query: 65 gtttactgccaatgcttacatgtttctttaaacaccaattgcctgccccagtttttcctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtttactgccaatgcttacatgtttctttaaacaccaattgcctgccccagtttttcctt 325
Query: 125 cctctcttgtttatttgctatcaacttttcctttcaagtgactttgtaaatactggtcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cctctcttgtttatttgctatcaacttttcctttcaagtgactttgtaaatactggtcag 385
Query: 185 ttacttcccaaagaatcacacctctggatggctttcttgaacatacagatcccactttca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttacttcccaaagaatcacacctctggatggctttcttgaacatacagatcccactttca 445
Query: 245 ctggggcagcagagggcagaccctgatacccacctccacacatgtcacatggatgcttag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ctggggcagcagagggcagaccctgatacccacctccacacatgtcacatggatgcttag 505
Query: 305 ggcccattcag 315
|||||||||||
Sbjct: 506 ggcccattcag 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 718
Length adjustment: 9
Effective length of query: 308
Effective length of database: 709
Effective search space: 218372
Effective search space used: 218372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_j07.g1 MSMg01no442_j07.g1 CHROMAT_FILE:
MSMg01no442_j07.g1 PHD_FILE: MSMg01no442_j07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:48 2005
(243 letters)
>mm_chr16_98144012_98144654
Length = 643
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%)
Strand = Plus / Minus
Query: 1 tcgctttatctgggcatcccacccacgcgccagcgcacagttcccagccaaggcgcgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcgctttatctgggcatcccacccacgcgccagcgcacagttcccagccaaggcgcgcca 384
Query: 61 agcgaggcaccccgacaccttctcacccaccactcaaggtagtggcaggagaggacttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agcgaggcaccccgacaccttctcacccaccactcaaggtagtggcaggagaggacttgc 324
Query: 121 gcccttaacgccgccgtgagggccctcggggcctttaaggaggcggagctgtaaaaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gcccttaacgccgccgtgagggccctcggggcctttaaggaggcggagctgtaaaaagag 264
Query: 181 actccgctcctgctccgcccccaggcccggcctcctgcggttactgcgggccgcgggcgg 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 263 actccgctcctgctccgcccccaggcccggcctcctgcggttactacgggccgcgggcgg 204
Query: 241 gac 243
|||
Sbjct: 203 gac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
