Query= MSMg01no443_i18.b1 MSMg01no443_i18.b1 CHROMAT_FILE:
MSMg01no443_i18.b1 PHD_FILE: MSMg01no443_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:11 2005
(346 letters)
>mm_chr16_40585578_40586323
Length = 746
Score = 596 bits (308), Expect = e-175
Identities = 335/344 (97%)
Strand = Plus / Minus
Query: 1 cctgtgccatcagagtgatataaactttttctgaaggggaaaaggtttacagttggatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cctgtgccatcagagtgatataaactttttctgaaggggaaaaggtttacagttggatag 485
Query: 61 gtcttgtgaattatgaaaacgaagccctgagatgtttgtaagggctttcaacttgtaact 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gtcttgtgaattatggaaacgaagccctgagatgtttgtaagggctttcaacttgtaact 425
Query: 121 atgagatcacatttgagtatagtgaccctaatctgaaatcagagctcaaagatgacttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atgagatcacatttgagtatagtgaccctaatctgaaatcagagctcaaagatgacttcc 365
Query: 181 ctttcaacttgatcttctctgacactcacatccagaatgcatcccatggttatagcaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 364 ctttcaacttgatcttctctgacactcacatccagaatgcatcccatggctatagcaggg 305
Query: 241 cagtttgtcttttttatttgtaaccccaagcatcctgttatagtacttgtggatgccaca 300
||| ||| || | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cagcttgcctggtctatttgtaaccccaagcatcctgttatagtacttgtggatgccaca 245
Query: 301 aaagctaagcctcttccttatagtgcaaagatctccccagggac 344
||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 244 aaagctaagcctcttccttatagtgcaaacagctccccagggac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no443_i18.g1 MSMg01no443_i18.g1 CHROMAT_FILE:
MSMg01no443_i18.g1 PHD_FILE: MSMg01no443_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:11 2005
(241 letters)
>mm_chr16_40419993_40420635
Length = 643
Score = 373 bits (193), Expect = e-108
Identities = 230/243 (94%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 1 aaatgtccaatgggtatgggtggaaagattgactttagtg--aagagaacgacacactga 58
||||||||||||||||| |||||||||||||||||||||| || | || ||||||||||
Sbjct: 201 aaatgtccaatgggtataggtggaaagattgactttagtgaaaaaaaaaggacacactga 260
Query: 59 cttggaaaacagtcctttttctggctgtctatgaaggacccatttcacctcacagtcagg 118
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 cttggaaaacagtcctttttctggctgtccatgaaggacccatttcacctcacagtcagg 320
Query: 119 aagcaatactaatgctcagaaaatcaattcatatgctactgtggcaagagaagaagcata 178
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 321 aagcaatactaatgctcagaaaatcaaatcatatgctactgtggcaagagaagaagcaaa 380
Query: 179 tgtgtgatcgtcagcaaaacagctgtttcacagaagggatagcactatgaacggcagatt 238
| ||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 381 tatgtgatcatcagcaaaacagctgtttcacagaagggacagcactatgaatggcagatt 440
Query: 239 gcg 241
|||
Sbjct: 441 gcg 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 643
Length adjustment: 9
Effective length of query: 232
Effective length of database: 634
Effective search space: 147088
Effective search space used: 147088
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
