Query= MSMg01no446_l06.b1 MSMg01no446_l06.b1 CHROMAT_FILE:
MSMg01no446_l06.b1 PHD_FILE: MSMg01no446_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:18 2005
(413 letters)
>mm_chr16_82648606_82649418
Length = 813
Score = 760 bits (393), Expect = 0.0
Identities = 408/413 (98%)
Strand = Plus / Plus
Query: 1 gcgtctattatttgataaataatcacaggactgggtatagatacagatatataataaaat 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 gcgtctattatttgataaataatcacaggactatgtatagatacagatatataataaaat 260
Query: 61 aaatatgtcaagaagacacctccattcatatatttattctaatattattaaagtataatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatatgtcaagaagacacctccattcatatatttattctaatattattaaagtataatt 320
Query: 121 tgctatatagacacaaattgtattatttaactttaaaaataattgaatatttttattttc 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttatatagacacaaattgtattatttaactttaaaaataattgaatatttttattttc 380
Query: 181 aatagcatacatagaagaggttgttgtgttgagagaaatgagctagattcagaaagataa 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatagcatacatagaagaggatgttgtgttgagagaaatgagctagattcagaaagataa 440
Query: 241 ataaaatttgcctcatgtggaaaatcaaatgttggtgtcagataaatgtgtaagtataat 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaaatttgcctcatgtggaaaatgaaatgttggtgtcagataaatgtgtaagtataat 500
Query: 301 aatggagagcatacaaattccagttgattttatattgttgatatgatgaagctatgtcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatggagagcatacaaattccagttgattttatattgttgatatgatgaagctatgtcag 560
Query: 361 atggatggaaaagacttcacttcaggtacaaatattgacagcaagagcagaaa 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atggatggaaaagacttcacttcaggtacaaatattgacagcaagagcagaaa 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no446_l06.g1 MSMg01no446_l06.g1 CHROMAT_FILE:
MSMg01no446_l06.g1 PHD_FILE: MSMg01no446_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:19 2005
(421 letters)
>mm_chr16_82792612_82793430
Length = 819
Score = 710 bits (367), Expect = 0.0
Identities = 407/421 (96%), Gaps = 2/421 (0%)
Strand = Plus / Minus
Query: 1 aagtagataaaagaagggagttataatgtaattatatttcaattaaaattatttttatat 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 507 aagtagataaaagaagggagttataatgtaattatatttcaattaaaatgatttttatat 448
Query: 61 ttttaaagtatttaaaatgaattgtctaacaatgtaaattaaaaattgacgaaatccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 447 ttttaaagtatttaaaatgaattgtctaacaatgtaaattaaaaattgaagaaatccatt 388
Query: 121 ttcatagtgcaaaaactttttttttttaacgcttgagtacttattaggatatagttaaga 180
|||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 387 ttcatagtgcaaaaac--ttttttttaaatgcttgagtacttattaggatatagttaaga 330
Query: 181 atggagtcataaaagaattctgagtggttgagaaaaactccttcccccaaaagagaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atggagtcataaaagaattctgagtggttgagaaaaactccttcccccaaaagagaaaga 270
Query: 241 gagacagagacttatagacaaacagagagagagagacagagagagagagagagaagtctt 300
||||||||||| | ||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 269 gagacagagacagagagacaaacagagagagagagacagacagagagagagagaggtctt 210
Query: 301 gaaccctaagtttcttcaaaactacaaaattattaatgaaatgtgtttttgagtccttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaaccctaagtttcttcaaaactacaaaattattaatgaaatgtgtttttgagtccttct 150
Query: 361 caggtatagtttacagaaatgagtttaccataaattgttacaactggactattattatgt 420
|||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 149 caggtatagtgtacagaaatgagtttatcgtaaattgttacaactggactattattatgt 90
Query: 421 t 421
|
Sbjct: 89 t 89
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 819
Length adjustment: 9
Effective length of query: 412
Effective length of database: 810
Effective search space: 333720
Effective search space used: 333720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
