GCTATACGACTCACTATAGGTCCAGAAACCGCGGAATTCTCCCTTCAGAT
TTCATTTCTTTTTCCAGCCTGACCTCTTCATCACTCTGCTACCTTGAGCT
GACCAGTCTCTTTGTTTTTCCTAGGTCAGGAAATAGTGAGATAATTATAG
TCGGTTCCACTTTGTTGTGAGAGTTAAATGGGTAAACATGCAAAGCAGTG
AACTTTTTCAGAATGTGTTCTCTATAAATGTCACTTCCTCTATTTCCCAT
CTATATGCAGTTATTCTGTTGAGAAACCTCCATTCTGCCTGGGTGAAAAC
TTCATGCTACCTCTTTGTATATTCTCCTTGGACATACAGATTGTCATTTC
TCCCCCCTTTTAATCAGTATTCTATGAAAGACTATTGATGAGTCATTTTA
ATATTGGCGAGATTGTTATCATGCTTTTCTTCACGGATTTGTTGCTGCTG
CTGATATTTGAAATGGTTTAGGGAAATAGTTGACCTACTGGTACCAAGAG
ACTGCCATTTTCCTGCTTGTGAGGCCAGAGCTGTGTACTGTGTTTGTGCT
GACTCATCCTGACATCCTATTACTGTGTGGTTGTGTACCTTCTTTCACAC
ACAGTTCAGTGAATTCTTCACACGTGACTGCCGATGAAAAACCCGCTTTT
AAGTTGCTTCTCCCTTGTCTCCCACAAGGGAAGCACTATTAATATGAGGT
CTCAAGGTGGACTCCTTCCTTTTTTCACCACAAAACAACAACTACTGGGA
TTTTCCTTTTTCTGAAATTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT
TCGCCATTCAGAACCTGGTAACAAAACTATTATATGCTCAGAGATCACTA
ATTACTTGTTGAAATACTAAGCAGTGGCATAAGCAATGACTAAAGGAGTA
GAGAGAACACGATCAAACTGAGTTTCAAAGCAGAAAGGCTTTGTATAAGA
GATACTATACTGTTAGAGCCTCTTGATAACTAAGTGCTTTGGTAGGTGGG
GAATCTAGGGTCAACTTCTCCACATGGTCAAAATTAATAAAAATATGAGA
GTGCTCATCATCAGGCTGTTCAACGTTGCATCGTCCCAGTACTGCTAGCC
AATATTCATAGATTGTATATCTAGCTATAGAATTATGCCCAGACCGCAGG
CTTTCAGGTTTTTTGCTTTTGTTCCCGCCTCGTTCTGCCTTGCCTCCCTC
CCTTTTTTTACCTCCTTCTTTCCCCCTTCCCTTCCCCTTTTCCTCCCATC
CCCCTTTTTTCTCTTTTTTTCCCCTCTCCCCCTCTTTTCCCCCTCTTCTC
CCTTTCCTCTCCTTCTTCCCCTTCCCCCCCTTTCTCTTCCCCTTTTTTCC
CCTCTTTTTCCACCTCTCTTCCCTCTTATTTTCCCTTTTCTCTCCCCATT
CCCCTTTCTCTTTTCTTTTTTTTCTCCCTATTTTTCTCTGCTCACTTCTT
CACCTCCGTCCTCTTACCCCTTTCCCTCCCACCCCACCATCGTTTCTCTC
CCCTCCCTTCTTCCCTCCCACTCTCTCCATTTCCTTTTTTTTCATCCCCT
TC

Query= MSMg01no446_o17.b1 MSMg01no446_o17.b1 CHROMAT_FILE:
MSMg01no446_o17.b1 PHD_FILE: MSMg01no446_o17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:35 2005
         (255 letters)



>mm_chr16_52418858_52419512
          Length = 655

 Score =  485 bits (251), Expect = e-142
 Identities = 254/255 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctttttccagcctgacctcttcatcactctgctaccttgagctgaccagtctctttgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tctttttccagcctgacctcttcatcactctgctaccttgagctgaccagtctctttgtt 396

                                                                       
Query: 61  tttcctaggtcaggaaatagtgagataattatagtcggttccactttgttgtgagagtta 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 395 tttcctaggtcaggaaatagtgagataattatagtccgttccactttgttgtgagagtta 336

                                                                       
Query: 121 aatgggtaaacatgcaaagcagtgaactttttcagaatgtgttctctataaatgtcactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aatgggtaaacatgcaaagcagtgaactttttcagaatgtgttctctataaatgtcactt 276

                                                                       
Query: 181 cctctatttcccatctatatgcagttattctgttgagaaacctccattctgcctgggtga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cctctatttcccatctatatgcagttattctgttgagaaacctccattctgcctgggtga 216

                          
Query: 241 aaacttcatgctacc 255
           |||||||||||||||
Sbjct: 215 aaacttcatgctacc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 655
Length adjustment: 9
Effective length of query: 246
Effective length of database: 646
Effective search space:   158916
Effective search space used:   158916
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no446_o17.g1 MSMg01no446_o17.g1 CHROMAT_FILE:
MSMg01no446_o17.g1 PHD_FILE: MSMg01no446_o17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:35 2005
         (230 letters)



>mm_chr16_52277618_52278247
          Length = 630

 Score =  391 bits (202), Expect = e-113
 Identities = 220/226 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagaacctggtaacaaaactattatatgctcagagatcactaattacttgttgaaatact 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 cagaacctggtaacaaaactattatacgctcagagatcactaattacttgttgaaatact 260

                                                                       
Query: 61  aagcagtggcataagcaatgactaaaggagtagagagaacacgatcaaactgagtttcaa 120
           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 261 aagcagtggcataagcaatgactaaaggattagagagaacatgatcaaactgagtttcaa 320

                                                                       
Query: 121 agcagaaaggctttgtataagagatactatactgttagagcctcttgataactaagtgct 180
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 321 agcagaaaggctttgtataagagatactatactgttagagcctcttgacaactaagtact 380

                                                         
Query: 181 ttggtaggtggggaatctagggtcaacttctccacatggtcaaaat 226
           ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 ttggtaggtggggaatctagggtcaacttttccacatggtcaaaat 426


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space:   137241
Effective search space used:   137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)