NCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCTTGAGATTACCATCTACGGTAAATGTATATATTCATAGTTA
TGGGTGGATATATTAGTTAGTTAAATGCTTAGCAGAGCCTTTAGAATTCA
ACCATTGAATAAGTAACCTGATAATTTTCCAGAGGAAGACCTGGAGGTCT
GAGCTGTAGGCCCAATCCAAGGCCAGATATTGAACAACCACAAAAGTAAA
TATTTCAAACCATGCCTTTTTGATATGAAGTTCATCTGTCTTTCAACATC
ATCACAATATCCCCTGAAGCTTTCCATATTGTCTTGTTTAGTAAGAAATA
CAATTTACAAAATCAATGATGTATGTACATGTATTATGAAGAGAATTGTT
CTTTTATGCATCTTCAGCGAAATGAATAGTTTGATATATTGGACAATGCA
GTCTATGTACTGTTATGAAATACTCAGCGCTCTGATACATTTGATTCAAC
AATTTATTTCTCAATTCAGGTTGTTATTTGTTCTGAACAAATCATACAGG
GTGATTGTATTATCGCACTCGGATCTAGGTTAGTAATTGACTGCTGCTGT
CTGTGAACTAAAGAAGCAAAAGAAATACAACCGATAAAGAGAAGACATTT
TGCAACAATTTGAGTTCGTCTGCAGATTGCAGAATAAGTAAGTTGCTGGT
TATGCGTTTCTATTTTAATAAGATACCAATAGGAATGAATAATC

NATTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCAAAT
GGCTGAGAAGCACCTGAAAAAATGTTCAGCATCCTTAATCATCAGGTAAA
TGCAAATCAAAATAACCCTGTGATTCCACCTCACACCAGTCAGAATGGCT
AAGATAAAAAATTCAGGTGACAGCAAATGCTGTCAAGTATGTGGAGAAAG
AGGAACACTACTCCATTGTTGGTGATTGCAAGCTCGTACAACCACTCTGG
AAATCAGTCTGGTGGTTCCTCATAAAATTTTACATAGTACTTCTGGAGGA
TCCCACAATACCTCTCCTGTGCATATATCCAGAAGATTTTCCAACTGGTA
AGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAACC
AGAAGCTGGAAATAACCCAAATGCCCCTCAACAGAGGAAGGGATACAGAA
AATGTGGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATG
AATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTG
AGTGAGGTAACCCAATCACAAAAGAACTTACACAATATGTACTCACTGAT
AAGTGGATATTTGCCCAGAAACTTAGAATACCCCAGATATAAGATACTAT
TTGCAAAACACATGAAATTTCAGAATAAAGACCAAGN

Query= MSMg01no447_j02.b1 MSMg01no447_j02.b1 CHROMAT_FILE:
MSMg01no447_j02.b1 PHD_FILE: MSMg01no447_j02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:30 2005
         (616 letters)



>mm_chr16_80087381_80088397
          Length = 1017

 Score = 1147 bits (593), Expect = 0.0
 Identities = 608/613 (99%), Gaps = 1/613 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccttgag-attaccatctacggtaaatgtatatattcatagttatgggtggatat 63
           |||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 gaattccttgagaaatagcatctacggtaaatgtatatattcatagttatgggtggatat 758

                                                                       
Query: 64  attagttagttaaatgcttagcagagcctttagaattcaaccattgaataagtaacctga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 attagttagttaaatgcttagcagagcctttagaattcaaccattgaataagtaacctga 698

                                                                       
Query: 124 taattttccagaggaagacctggaggtctgagctgtaggcccaatccaaggccagatatt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 taattttccagaggaagacctggaggtctgagctgtaggcccaatccaaggccagatatt 638

                                                                       
Query: 184 gaacaaccacaaaagtaaatatttcaaaccatgcctttttgatatgaagttcatctgtct 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gaacaaccacaaaagtaaatatttcaaaccatgcctttttgatatgaagttcatctgtct 578

                                                                       
Query: 244 ttcaacatcatcacaatatcccctgaagctttccatattgtcttgtttagtaagaaatac 303
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttcaacatcatcacaatctcccctgaagctttccatattgtcttgtttagtaagaaatac 518

                                                                       
Query: 304 aatttacaaaatcaatgatgtatgtacatgtattatgaagagaattgttcttttatgcat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 aatttacaaaatcaatgatgtatgtacatgtattatgaagagaattgttcttttatgcat 458

                                                                       
Query: 364 cttcagcgaaatgaatagtttgatatattggacaatgcagtctatgtactgttatgaaat 423
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cttcagcgaaatgaataggttgatatattggacaatgcagtctatgtactgttatgaaat 398

                                                                       
Query: 424 actcagcgctctgatacatttgattcaacaatttatttctcaattcaggttgttatttgt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 actcagcgctctgatacatttgattcaacaatttatttctcaattcaggttgttatttgt 338

                                                                       
Query: 484 tctgaacaaatcatacagggtgattgtattatcgcactcggatctaggttagtaattgac 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tctgaacaaatcatacagggtgattgtattatcgcactcggatctaggttagtaattgac 278

                                                                       
Query: 544 tgctgctgtctgtgaactaaagaagcaaaagaaatacaaccgataaagagaagacatttt 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tgctgctgtctgtgaactaaagaagcaaaagaaatacaaccgataaagagaagacatttt 218

                        
Query: 604 gcaacaatttgag 616
           |||||||||||||
Sbjct: 217 gcaacaatttgag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1017
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1007
Effective search space:   610242
Effective search space used:   610242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)