Query= MSMg01no448_d15.b1 MSMg01no448_d15.b1 CHROMAT_FILE:
MSMg01no448_d15.b1 PHD_FILE: MSMg01no448_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:25 2005
(464 letters)
>mm_chr16_61756953_61757817
Length = 865
Score = 799 bits (413), Expect = 0.0
Identities = 452/465 (97%), Gaps = 2/465 (0%)
Strand = Plus / Plus
Query: 2 caaatggctgagaagcacgtgaaaaaaaaatgttcagcatccttaatcatcagggaaatg 61
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaatggctgagaagcacgtaaaaaaaaaatgttcagcatccttaatcatcagggaaatg 260
Query: 62 caaatcaaaacaacc-tgagattccacctcaccccagtcagaatgggtaagatgaaaaat 120
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 caaatcaaaacaaccctgagattccacctcaccccagtcagaatggctaagatgaaaaat 320
Query: 121 tcaggtgacagcagatgctggcgaggatgtggagaaagaggaacactcctccattgttgg 180
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 tcagatgacagcagatgctggcgaggacgtggagaaagaggaacactcctccattgttgg 380
Query: 181 tagaattgcaagcttgtacaacctctctggaagtcagtctggcggttcttcagaaaattg 240
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 381 tagaattgcaagcttgtacaaccactctggaaatcagtctggcggttcttcagaaaattg 440
Query: 241 gacatagtactttttgaggatcctgcattacctctcatgagcaagagtttatcctttgcc 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacatagtacttccggaggatcctgcattacctctcatgagcaagagtttatcctttgcc 500
Query: 301 attacatcacataaaag-aatgacaaaatatatgtctagacagaaaacaaatctgacttg 359
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attacatcacataaaaggaatgacaaaatatatgtctagacagaaaacaaatctgacttt 560
Query: 360 atttccaattctccatatctgtgaaaaattctttaactattgattcttctcatggcaacc 419
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 atttccaattctccatatctgtgaaaaattctttaactgttgattcttctcatggcaacc 620
Query: 420 caaaattagttcataatcacattcacattacaaaatatgtcacca 464
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaaattagttcataatcacattcacattacaaaatatgtcacca 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 865
Length adjustment: 10
Effective length of query: 454
Effective length of database: 855
Effective search space: 388170
Effective search space used: 388170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_d15.g1 MSMg01no448_d15.g1 CHROMAT_FILE:
MSMg01no448_d15.g1 PHD_FILE: MSMg01no448_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:25 2005
(243 letters)
>mm_chr16_61943566_61944207
Length = 642
Score = 424 bits (219), Expect = e-123
Identities = 237/243 (97%), Gaps = 1/243 (0%)
Strand = Plus / Minus
Query: 1 aggcaatattttcaaaagtaacttcgtaacttggagaaaggtatacacagacattatata 60
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 442 aggcaatattttcaaaagtaacttcgtaacttggagaaaggtagagacagacattatata 383
Query: 61 ctgcatttccttgtgtttatttctgaaaaatattccaagctattgggaaagatttccctg 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 382 ctgcatttccttgtgtttatttctgagaaatattccaagctattgggaaagatttccctg 323
Query: 121 tatgaaaaaaaaagtttcaatggaaaaattatcattcaaaagatttgtataaattcttaa 180
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 322 tatg-aaaaaaaagtttcaatggaaaaattatcattcaaaagatttgtataaattccgaa 264
Query: 181 ggcagaacacatttacagattcccaaaagacaaggaaaagaaaagggaggataacttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggcagaacacatttacagattcccaaaagacaaggaaaagaaaagggaggataacttctc 204
Query: 241 caa 243
|||
Sbjct: 203 caa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 642
Length adjustment: 9
Effective length of query: 234
Effective length of database: 633
Effective search space: 148122
Effective search space used: 148122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
