Query= MSMg01no449_p17.b1 MSMg01no449_p17.b1 CHROMAT_FILE:
MSMg01no449_p17.b1 PHD_FILE: MSMg01no449_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:45 2005
(416 letters)
>mm_chr16_28008972_28009787
Length = 816
Score = 708 bits (366), Expect = 0.0
Identities = 397/416 (95%), Gaps = 14/416 (3%)
Strand = Plus / Minus
Query: 1 ccctgaattttgttgctcctttgtctaaggatgacctgtgtcagtctgctgtgtagatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ccctgaattttgttgctcctttgtctaaggatgacctgtgtcagtctgctgtgtagatgt 710
Query: 61 gtagatttcctctctctctctctctctctctctctctctctctctctctctctctctctc 120
||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 709 gtagatttc--------------ctctctctctctctctctctctctctctctctctctc 664
Query: 121 tctctctctctctctctctcccctttgccctccctgtctctctgtctgtccaatttgcca 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 663 tctctctctctctctctctcccctttgcccttcctgtctctctgtctgtccaatttgcca 604
Query: 181 ctctttcagaactgttgaacatcaggacttttcattcaccatggatagaacgtagcaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ctctttcagaactgttgaacatcaggacttttcattcaccatggatagaacgtagcaatt 544
Query: 241 gtctaggtctcttgtttctttacatcagatccttaaggctatttctgctgaaaagttggt 300
|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 543 gtctaggtctcttgttcctttacatcagatccttaaggctatctctgctgaaaagttggt 484
Query: 301 gtgccactcctggaacctgtaaccttctctccggtttgcatttctattctgaacctttgc 360
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gtgccactcctggaatctggaaccttctctccggtttgcatttctattctgaacctttgc 424
Query: 361 atctctgttctttgttgattttctacccacctccggagggccactttatgcactta 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atctctgttctttgttgattttctacccacctccggagggccactttatgcactta 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 37
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_p17.g1 MSMg01no449_p17.g1 CHROMAT_FILE:
MSMg01no449_p17.g1 PHD_FILE: MSMg01no449_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:45 2005
(231 letters)
>mm_chr16_27870804_27871434
Length = 631
Score = 366 bits (189), Expect = e-106
Identities = 198/201 (98%)
Strand = Plus / Plus
Query: 1 actttacagactgacatcctgatgtttcacttcaccacaaacaccatgtcataaaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttacagactgacatcctgatgtttcacttcaccacaaacaccatgtcataaaaaaat 260
Query: 61 tccattcaaggtggaaggtaacattgcccaggagtagccaggagtagcactggacacaat 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccattcaaggtggaaagtaacattgcccaggagtagccaggagtagcactggacacaat 320
Query: 121 gagtgtgccctttagccagcaatcattaatcaaaaagaaggaggaggagcaggaggagga 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 gagtgtgccctttagccagcaatcattaatcaaaaagaaggaggaagagcaggaggagga 380
Query: 181 agagaaagaggaagaggaaga 201
|||| ||||||||||||||||
Sbjct: 381 agaggaagaggaagaggaaga 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
