Query= MSMg01no451_p15.b1 MSMg01no451_p15.b1 CHROMAT_FILE:
MSMg01no451_p15.b1 PHD_FILE: MSMg01no451_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:24 2005
(708 letters)
>mm_chr16_45921875_45922982
Length = 1108
Score = 1035 bits (535), Expect = 0.0
Identities = 548/553 (99%), Gaps = 2/553 (0%)
Strand = Plus / Minus
Query: 39 actttaaagaaagagaaggatctgcataagtggaaaaagttaggtaatgagaaagacagt 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 actttaaagaaagagaaggatctgcataagtggaaaaagttaggtaatgagaaagacagt 1049
Query: 99 ccagagccaacagctgaagatctttggctgtgtcccaaggtccacgcttcccccctgtgg 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 ccagagccaacagctgaagatctttggctgtgtcccaaggtccacgcttcccccctgtgg 989
Query: 159 aaggtgcttcctctgggagggttctcattacatcatcaatgtattttttccaaataacaa 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 aaggtgcttcctctgggagggttctcattacatcatcaatgtattttttccaaataacaa 929
Query: 219 actccctggagtaggaaatctgcctggggaagcatttatcattcccaagcaacttagacg 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 actccctggagtaggaaatctgcctggggaagcatttatcattcccaagcaacttagacg 869
Query: 279 tcagatctttgtagaaagtattcttttttatatagtttccctggg--gtgtgtgtgtgtg 336
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 868 tcagatctttgtagaaagtattcttttttatatagtttccctggggtgtgtgtgtgtgtg 809
Query: 337 tgtgcatttatgtatgtgtttcctctttctttgaaggttattaattagtaagacatccca 396
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 808 tgtgcatttatgtatgtgtttcctctttctttaaaggttattaattagtaagacatccca 749
Query: 397 gatttaatttggcttttaatttgttactattctaatgcaaataccgagtggctgtccttt 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gatttaatttggcttttaatttgttactattctaatgcaaataccgagtggctgtccttt 689
Query: 457 gggaaggtgtggttttgatggttttgcctcgagaaacacttctcctgattgaagtattca 516
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 688 gggaaggtgtggttttgatggtttttcctcgagaaacacttctcctgattgaagtattca 629
Query: 517 cacactaacacacatggaatatgccaaattgtaagactctagaaacatacttgaaaaaga 576
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 628 cacactaacacacatggaatatgccaaattataagactctagaaacatacttgaaaaaga 569
Query: 577 tggataatataca 589
|||||||||||||
Sbjct: 568 tggataatataca 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 708
Length of database: 1108
Length adjustment: 10
Effective length of query: 698
Effective length of database: 1098
Effective search space: 766404
Effective search space used: 766404
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no451_p15.g1 MSMg01no451_p15.g1 CHROMAT_FILE:
MSMg01no451_p15.g1 PHD_FILE: MSMg01no451_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:24 2005
(694 letters)
>mm_chr16_45749685_45750778
Length = 1094
Score = 1342 bits (694), Expect = 0.0
Identities = 694/694 (100%)
Strand = Plus / Plus
Query: 1 aggctcccagatgagagaaacatggagcagtgtttttttctgtttctatttctatttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggctcccagatgagagaaacatggagcagtgtttttttctgtttctatttctatttctt 260
Query: 61 tttcttttcttttctcttctcttcttttcttttcttttttctttctgagatagggtctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcttttcttttctcttctcttcttttcttttcttttttctttctgagatagggtctca 320
Query: 121 gcatgttgtctaggttagtggcataccagtaggttcaagtgatcctcctgcctcagcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatgttgtctaggttagtggcataccagtaggttcaagtgatcctcctgcctcagcctc 380
Query: 181 ccaaattttctaggttcagatactgaatttcaattcccttttatttttaacagatttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaaattttctaggttcagatactgaatttcaattcccttttatttttaacagatttgaa 440
Query: 241 tatatcactttgattcatttgtttttgttgttgttgtttggtcttgtttttgtcttttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatatcactttgattcatttgtttttgttgttgttgtttggtcttgtttttgtcttttat 500
Query: 301 tcttttctattggaacattctgagtgaggctgtctataaaggctagcatgctacacaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttttctattggaacattctgagtgaggctgtctataaaggctagcatgctacacaaat 560
Query: 361 gtgtttatgtgttgcttgatacgtgtttatgtccatggatgatagactggacttcttatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgtttatgtgttgcttgatacgtgtttatgtccatggatgatagactggacttcttatg 620
Query: 421 acgcaggtagctttcctattgcactgaaggttgctactgtggaccttcatgagagactct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acgcaggtagctttcctattgcactgaaggttgctactgtggaccttcatgagagactct 680
Query: 481 ggataagaaagcagaccctggggctagagagatatagctcaatggttaagagtactgact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggataagaaagcagaccctggggctagagagatatagctcaatggttaagagtactgact 740
Query: 541 gttcttccagaggaccttggttcaatccccagaacccatactggtgtgatactacccttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttcttccagaggaccttggttcaatccccagaacccatactggtgtgatactacccttc 800
Query: 601 cttagcatcagaagagacttggactagtctaatgcttataacgggcatgtttcacatttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cttagcatcagaagagacttggactagtctaatgcttataacgggcatgtttcacatttg 860
Query: 661 atgcacgtgtgaataagatgctaactcgattctt 694
||||||||||||||||||||||||||||||||||
Sbjct: 861 atgcacgtgtgaataagatgctaactcgattctt 894
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space: 741456
Effective search space used: 741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
