Query= MSMg01no452_c12.b1 MSMg01no452_c12.b1 CHROMAT_FILE:
MSMg01no452_c12.b1 PHD_FILE: MSMg01no452_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:38 2005
(654 letters)
>mm_chr16_44150209_44151262
Length = 1054
Score = 1160 bits (600), Expect = 0.0
Identities = 639/654 (97%), Gaps = 5/654 (0%)
Strand = Plus / Minus
Query: 1 ttgtagaaagacagaaatgcgttcacacatacatcttatttttgtaaacaaaaatcttca 60
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 654 ttgtagaaagacagaaatgcattcacatatacatcttatttttgtaaacaaaaatcttca 595
Query: 61 aatcttaacatttcaacctccaactatatcaagccgtccagttattaagtctgcttttgg 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aattttaacatttcaacctccaactatatcaagccgtccagttattaagtctgcttttgg 535
Query: 121 tgcaaatctgtacaacaaatacatattatatgtatgtataccttgtatggatatttgtga 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 534 tgcaaatctgtacaacaaatacatattacatgtatgtataccttgtatggatatttgtga 475
Query: 181 gagaaattaaatccaaggtgattccactgagccttcattctaatgttatctttcattagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gagaaattaaatccaaggtgattccactgagccttcattctaatgttatctttcattagt 415
Query: 241 gttatttttaaggaaataatgaccttaaaagatctttatgtgcttaagtttaaatattac 300
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gtcacttttaaggaaataatgaccttaaaagatctttatgtgcttaagtttaaatattac 355
Query: 301 caaacgtgacttaaagcaatgctggtgttaaatgagtcaaaacaagcaaaaagtcgtaaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 354 caaacgtgacttaaagcaatgctggtgttaaatgagtcaaaacaagcaaaaagtcgtaga 295
Query: 361 gagaatgtacttcaagactttttacataaaatgataatgtaacagactacttttgagaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gagaatgtacttcaagactttttacataaaatgataatgtaacagactacttttgagaat 235
Query: 421 tgttacttccaacacactattgaaatactagaagagtccagcggtggtgtctcattcctt 480
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 234 tgttacttccaacacactatagaaatactagaagagtccagcggtggtgtcttattcctt 175
Query: 481 taatcccagaactgggaggcagagtgagttcgaggccagcctggtctacagagtgagttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 taatcccagaactgggaggcagagtgagttcgaggccagcctggtctacagagtgagttc 115
Query: 541 caggacagccagggtcacacagacagacaaacaaaacaaaaactacaaggaacatatgaa 600
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 114 caggacagccagggtcacacagacagacaaacaaaacaaaa---acaaggaacttatgaa 58
Query: 601 tttcagaagtaaaagagcaagaaccctatattgttggcctaaaacttaagtcag 654
|||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 tttcagaagt--aagagcaagaaccctatattgttggcctaaaacttaagtcag 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_c12.g1 MSMg01no452_c12.g1 CHROMAT_FILE:
MSMg01no452_c12.g1 PHD_FILE: MSMg01no452_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:38 2005
(632 letters)
>mm_chr16_43989722_43990754
Length = 1033
Score = 1193 bits (617), Expect = 0.0
Identities = 629/633 (99%), Gaps = 1/633 (0%)
Strand = Plus / Plus
Query: 1 ttctcaattaaagacttgataaggccccatggttgtttcctgtacttcaagtctgtggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctcaattaaagacttgataaggccccatggttgtttcctgtacttcaagtctgtggag 260
Query: 61 actctaatgggatgagaagaaaat-atatttctttagagacagactttagccagcagagg 119
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 actctaatgggatgagaagaaaataatatttctttagagacagactttagccagcagagg 320
Query: 120 agaccagaggcgttcagggactgtggccactactactttagctatttcactgcaatgaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaccagaggcgttcagggactgtggccactactactttagctatttcactgcaatgaaa 380
Query: 180 cgtgaggttgcattctgtggagagccaaaagaattaaatgtcattactattatcaaataa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgtgaggttgcattctgtggagagccaaaagaattaaatgtcattactattatcaaataa 440
Query: 240 aatttgttcttcttttaaaaacattgtaagctgctaataacctcatcaaattggaatact 299
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 aatttgttcttcttttaaaaacattgtgagctgctaataacctcatcaaattggaatact 500
Query: 300 ctaccctcgcctaaacagcaataaatgctgcagtaaatgctaaggaattaaataaatttc 359
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 501 ctaccctcgcctaaacagcaatgaaggctgcagtaaatgctaaggaattaaataaatttc 560
Query: 360 taaatgcctcggggatctctagtgatcacacactagtcgaaagtaattctactaattagg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaatgcctcggggatctctagtgatcacacactagtcgaaagtaattctactaattagg 620
Query: 420 gccaagcaaagccttcgatggccctcgctcttcaaggtgccagccttcttcattcccact 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gccaagcaaagccttcgatggccctcgctcttcaaggtgccagccttcttcattcccact 680
Query: 480 gcagcagaggaccttatggctcgccatgagttcccctaatctcctgacccctgagaccct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcagcagaggaccttatggctcgccatgagttcccctaatctcctgacccctgagaccct 740
Query: 540 tacactggatcgcaggactagttctggccaactctacagctttttcttcctgtggcaact 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tacactggatcgcaggactagttctggccaactctacagctttttcttcctgtggcaact 800
Query: 600 gaaggacatttattctggactgtgaagccccag 632
|||||||||||||||||||||||||||||||||
Sbjct: 801 gaaggacatttattctggactgtgaagccccag 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1033
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1023
Effective search space: 636306
Effective search space used: 636306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
