Query= MSMg01no453_a01.b1 MSMg01no453_a01.b1 CHROMAT_FILE:
MSMg01no453_a01.b1 PHD_FILE: MSMg01no453_a01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:44 2005
(619 letters)
>mm_chr16_20334327_20335345
Length = 1019
Score = 716 bits (370), Expect = 0.0
Identities = 376/378 (99%)
Strand = Plus / Minus
Query: 4 ggaattcaaggacatttgtgtttctggctaaggatagaattgcagagacatcagattaaa 63
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ggaattcaaggacaactgtgtttctggctaaggatagaattgcagagacatcagattaaa 319
Query: 64 gactgctggagactgtcatcagatggaaccctctggcaaacaggaaaggagaagtccaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gactgctggagactgtcatcagatggaaccctctggcaaacaggaaaggagaagtccaga 259
Query: 124 aaaactaatctacacatgaaggtcatggagaaagtgggcatgtttgagtagatcgctatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aaaactaatctacacatgaaggtcatggagaaagtgggcatgtttgagtagatcgctatt 199
Query: 184 cctgcacaaaacatcatgaccaagaagcaagttggggaggaaaggatttattcagcttac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 cctgcacaaaacatcatgaccaagaagcaagttggggaggaaaggatttattcagcttac 139
Query: 244 tcttccacattgctgttcatcactaaaggaagtcaggataaggactccacaaggtggagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tcttccacattgctgttcatcactaaaggaagtcaggataaggactccacaaggtggagg 79
Query: 304 accttgaaggcagagtggatacagaagccatggaggaatgaatgctgcctactggcttgc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 accttgaaggcagagtggatacagaagccatggaggaatgaatgctgcctactggcttgc 19
Query: 364 tcagcttgctttcttgta 381
||||||||||||||||||
Sbjct: 18 tcagcttgctttcttgta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_a01.g1 MSMg01no453_a01.g1 CHROMAT_FILE:
MSMg01no453_a01.g1 PHD_FILE: MSMg01no453_a01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:44 2005
(624 letters)
>mm_chr16_20159233_20160256
Length = 1024
Score = 1162 bits (601), Expect = 0.0
Identities = 619/625 (99%), Gaps = 1/625 (0%)
Strand = Plus / Plus
Query: 1 tttattcctagcttgtttgaaaagtaaatgttgatctagaaatattcatagagtaatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttattcctagcttgtttgaaaagtaaatgttgatctagaaatattcatagagtaatctt 260
Query: 61 gcaccttagtagaacaagatttcatctacagtttccctggttccatgatattctgtgact 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 gcaccttagtagaacaagatttcatctacagtttccctggttccatgatattctatgact 320
Query: 121 gttcctggtgataaatgagctgtttactcttgaatgccactatagaagaaacaaggtggc 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttcctcgtgataaatgagctgtttactcttgaatgccactatagaagaaacaaggtggc 380
Query: 181 atactttttacacttcgagttacttacttatttttatattatgtgtgtgagtgcctgtgt 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 atactttttacacttcgagttacttacttatttttattttatgtgtgtgagtgcctgtgt 440
Query: 241 ttatgtggtccacacgaatgcctggttgcctgctgaggccagaaaaagacatcagatccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatgtggtccacacgaatgcctggttgcctgctgaggccagaaaaagacatcagatccc 500
Query: 301 cacgactggagtcagagttgggagcctccatgtgtgttctgggaacaaacctggattctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacgactggagtcagagttgggagcctccatgtgtgttctgggaacaaacctggattctc 560
Query: 361 tggaaaggccgcccaggcttttaacccatgagccatccctcaggccctgcttatttattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 tggaaaggccgcccaggcttttaacccatgagccatccctcaggccctgcttatttactt 620
Query: 421 ttgagccagttttttgccaagctggccacaagctcacaatctccctgcctcagctgtctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgagccagttttttgccaagctggccacaagctcacaatctccctgcctcagctgtctg 680
Query: 481 catagctcatgctcagacacacaccaccattcccagttgctgttacacttgcatgtgtaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catagctcatgctcagacacacaccaccattcccagttgctgttacacttgcatgtgtaa 740
Query: 541 tttttgtatttgattattatttttttttt-gtatttgttttttgtttgctttagatctct 599
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 741 tttttgtatttgattattttttttttttttgtatttgttttttgtttgctttagatctct 800
Query: 600 agagaagtgcttgcatctcgctcca 624
|||||||||||||||||||||||||
Sbjct: 801 agagaagtgcttgcatctcgctcca 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
