Query= MSMg01no453_c13.b1 MSMg01no453_c13.b1 CHROMAT_FILE:
MSMg01no453_c13.b1 PHD_FILE: MSMg01no453_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:56 2005
(666 letters)
>mm_chr16_21968188_21969254
Length = 1067
Score = 1147 bits (593), Expect = 0.0
Identities = 650/669 (97%), Gaps = 4/669 (0%)
Strand = Plus / Plus
Query: 1 atgtactcagctccacttaatcctctgagaaccacagacggattcactatggccagtgca 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 200 atgtactcagctccacttaatcctctaagaaccacagacggattcactatggcccgtgca 259
Query: 61 cggtgcagagtaaatcatataatggtggctgtcagaacaaaggcaaagctgggggtgcgg 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 260 cggtgcagagtaaatcatataatggtggctgtaagaacaaaggcaaagctgggggtgcgg 319
Query: 121 ggctggagaggatgcttcagggtgcttgctgctcttccataaccccagttcagtttcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggctggagaggatgcttcagggtgcttgctgctcttccataaccccagttcagtttcagc 379
Query: 181 a-acacgctggcagctcacaactgcctgtaactctagctccaggggatccaatgtcctat 239
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acatacgctggcagctcacaactgcctgtaactctagctccaggggatccaatgtcctat 439
Query: 240 tttagcctccacagacactcatgcacaaatgctcacacaagcacgtttactttaaaaagg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttagcctccacagacactcatgcacaaatgctcacacaagcacgtttactttaaaaagg 499
Query: 300 aggtgtggagggctgacagtgcttgcttagtatgcacaagactctaaattcaatctccag 359
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 500 aggtgtggagggctgacagtgcttgcttagtatgcacaagactctaaattcagtctccag 559
Query: 360 catcactaaaagggaaggcttcagagatggctccatacaagcgtgaacacccgggtttgg 419
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catcactaaaagggaaggctgcagagatggctccatacaagcgtgaacacccgggtttgg 619
Query: 420 atcatcaccgcacatgtaaaagccagcgtcatgggtctgtgaccctggccctggagatgc 479
||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 620 atcatcaccgcacatgtaaaagccagcaccatgggtctgtgaccctggcc-tggagatgc 678
Query: 480 agagacaagtggctcccgggggtttgctggacagccagtctagcttagacagggagctct 539
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 679 agagacaagtggctcccgggggtttgctggacagccaggctagcttagacagggagctct 738
Query: 540 atgttcaacaagaggctctacctcaaaaa-ccatggagaaatgaccaaagaaaccatccg 598
||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 739 gtgttcaacaagagactctacctcaaaaaaccatggggaaatgaccaaagaaaccatccg 798
Query: 599 -tggcttctacacatacacacatgggcacatggatgcgttgggaaatcactcccacccat 657
|||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 799 ctggcctctacacatacacacatgggcacatggatgcgtggggaagtcactcccacccat 858
Query: 658 gcacataga 666
|||||||||
Sbjct: 859 gcacataga 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1067
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1057
Effective search space: 693392
Effective search space used: 693392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_c13.g1 MSMg01no453_c13.g1 CHROMAT_FILE:
MSMg01no453_c13.g1 PHD_FILE: MSMg01no453_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:56 2005
(678 letters)
>mm_chr16_22114664_22115749
Length = 1086
Score = 1276 bits (660), Expect = 0.0
Identities = 676/686 (98%), Gaps = 8/686 (1%)
Strand = Plus / Minus
Query: 1 tgtgtgctggacaaggcaggtagaattcattccacagatgcttctgcctctggtcagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 tgtgtgctggacaaggcaggtagaattcattccacagatgcttctgcctctggtcagcag 827
Query: 61 agaggtgtggagcaggtgcccatgggtgaaatggatagcaggtgggggagacaaggtatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 agaggtgtggagcaggtgcccatgggtgaaatggatagcaggtgggggagacaaggtatg 767
Query: 121 accaagaaggggctgagtaagaaggtctgtaccagaaaattgaaaaagctcaaaggaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 accaagaaggggctgagtaagaaggtctgtaccagaaaattgaaaaagctcaaaggaggc 707
Query: 181 agataaaggtcgtgaagagaggccaggagttgagttagtgtgagtaggcacttagaagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 agataaaggtcgtgaagagaggccaggagttgagttagtgtgagtaggcacttagaagtt 647
Query: 241 tgacaaaagttaggaggataatcaagatggctccctggtcct--------gatggtggga 292
|||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 646 tgacaaaagttaggaggataatcaagatggctccctggtcctgagctggggatggtggga 587
Query: 293 gaaagattctgctgctgtttgattacatgtaatgggggtattggtctttagaagacagga 352
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aaaagattctgctgctgtttgattacatgtaatgggggtattggtctttagaagacagga 527
Query: 353 ttttaaattgaggtgctggagacaatggctgtgccctgctggatttggactagacagctg 412
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 526 ttttaaattgaggtgctggagacaatggctgtgccctgctagatttggactagacagctg 467
Query: 413 cctgagttttcttgacaccatggctcagtgagctccccagaacagtttattttgggagat 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cctgagttttcttgacaccatggctcagtgagctccccagaacagtttattttgggagat 407
Query: 473 gataattaattttttttaaacaagggatatgtgaattgacttttctccagagatagtttt 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gataattaattttttttaaacaagggatatgtgaattgacttttctccagagatagtttt 347
Query: 533 gtactgtcttttctatatcttacccagtgtcattgattttcctaacacaaggcctgatac 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gtactgtcttttctatatcttacccagtgtcattgattttcctaacacaaggcctgatac 287
Query: 593 ctagagacagtagaagatagaaataggggttagacttggagagagggagagagttcctga 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctagagacagtagaagatagaaataggggttagacttggagagagggagagagttcctga 227
Query: 653 ggaagctggctgtctccaccagtcac 678
||||||||||||||||||||||||||
Sbjct: 226 ggaagctggctgtctccaccagtcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1086
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1076
Effective search space: 718768
Effective search space used: 718768
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
