NAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTAGGTATAATATATGGAGGAACAGGTCAGGCTTTGTTTTGTT
TATAAAGAAACAAAAAGGGAAAAGGCTGTAAAAGATACATATTCCAGTTT
GGACAGGTTTAGTTGCAGGTAGGGGTTAGTTGGAGAGTACTTACTGTGGT
AGTTTGAATAGGTATGACCCTCATAGACTCATGTGTTTAAATTCTTGGCC
CATAGGGAGTGGCACTATTAGGAACTGTGGCCTGTTGGAGTAGGTGTGGC
CTTGTTGGAGGAAGTGTGTCAGTATGGGGGGCGGGCTTTGAGGTTTCCTA
TGCTCAAGCTCAGCCCAGGGTGGGATACAGTTTCTTTCTCCTGCCTGCAG
ATCAAGATGTACAACTTAGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCA
CTAACTGCTCTTCCAAAAGTCCTGAGTTCAATTCCCAGCAACCACATGGT
GGCTCACAACCATCTGCAGTGTGATCTGATGCCCTCTTGTGTGTCTGAAG
GCAAGACAACTACTCATGTACTCATGTACATAAAATAAATAAATAAATCT
TTAAAAAAAAGACTTAAAACTTCTCCAGCACCATGTCTACCTGCATGCTG
CCATGCTTCTCACCGTGATGATAATGGACTGAACCTCTGAAACTGTAAGG
CAGCCCCAGTTAAATGTTTTCCTTTATAAAAGATGCTGTGGTCATGGTGT
CTCTTCACAGCAATAAA

CACAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAACCTGATATCCACAGCCTGCCT
CTTAGTGGGCTGGGGTTATAGCTCAGTAGCAGGCACTAGTCAGGCATATG
CAAGGCCCAAGGTTTAACCCTCAAAACCACAAATGTGTGTGTGTGTTTGT
GTTGTCTAGTTCTGTGTGTGTCTCTGTATATATCTCTCATCTTTGTGTCT
CTTGTTTCTGTGTGTGTGCCTGTGCATGTCACTGTGCATGTGTGTGTCTG
TATATATGTGTACTTCTCTGTGTGTGTGTTAACTGAACTAGATTTTGTGG
AATGAATAAAAAAATATTCTGATAATTCATGAAGCTGATGAGTTTAGAAA
ATCCAAGGTGTGTGTGATGGTTTGTATATGCTCAGCCCAGGGAGTAGCAC
TGTTAGAAGGAGTGGGTGTGGCCTTGTTGGAGCGGTATGTCACTGGGGGT
GTGGGCTTTAAGACCCTCATCCTAGCTGTCTGGAAGCCAGTATTCTGCTA
ATAGTCTTCAGATAAAGATGTAGAACTCTCAGCTTCTCCAGAATCATGCC
TGCCTGGATGCTGCCATGTTCCCACCTTGAAAATAATGGACTGAACCTCT
GAACTGTAAGCCAGCCACAATTAAATGTTGTCCTTCTAAGACTTGCCTTG
GTCATGGCATGTCTGTTCACAGCAGCAAAACCTTAAGACAAGTGTGTATG
ACACACACACA

Query= MSMg01no453_n13.b1 MSMg01no453_n13.b1 CHROMAT_FILE:
MSMg01no453_n13.b1 PHD_FILE: MSMg01no453_n13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:51 2005
         (684 letters)



>mm_chr16_13793246_13794329
          Length = 1084

 Score = 1247 bits (645), Expect = 0.0
 Identities = 669/677 (98%), Gaps = 1/677 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   aattcttaggtataatatatggaggaacaggtcaggctttgttttgtttataaagaaaca 65
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattcttatgtataatatatggaggaacaggtcaggctttgttttgtttataaagaaaca 265

                                                                       
Query: 66  aaaagggaaaaggctgtaaaagatacatattccagtttggacaggtttagttgcaggtag 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aaaagggaaaaggctgtaaaagatacatattccagtttggacaggtttagttgcaggtag 325

                                                                       
Query: 126 gggttagttggagagtacttactgtggtagtttgaataggtatgaccctcatagactcat 185
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gggctagttggagagtacttactgtggtagtttgaataggtatgaccctcatagactcat 385

                                                                       
Query: 186 gtgtttaaattcttggcccatagggagtggcactattaggaactgtggcctgttggagta 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtgtttaaattcttggcccatagggagtggcactattaggaactgtggcctgttggagta 445

                                                                       
Query: 246 ggtgtggccttgttggaggaagtgtgtcagtatggggggcgggctttgaggtttcctatg 305
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 446 ggtgtggccttgttggaggaagtgtgtcggtatggggggcgggctttgaggtttcctttg 505

                                                                       
Query: 306 ctcaagctcagcccagggtgggatacagtttctttctcctgcctgcagatcaagatgtac 365
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 506 ctcaagctcagcccagggtgggatacagtttctttctgctgcctgcagatcaagatgtac 565

                                                                       
Query: 366 aacttagggctggagagatggctcagtggttaagagcactaactgctcttccaaaagtcc 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aacttagggctggagagatggctcagtggttaagagcactaactgctcttccaaaagtcc 625

                                                                       
Query: 426 tgagttcaattcccagcaaccacatggtggctcacaaccatctgcagtgtgatctgatgc 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgagttcaattcccagcaaccacatggtggctcacaaccatctgcagtgtgatctgatgc 685

                                                                       
Query: 486 cctcttgtgtgtctgaaggcaagacaactactcatgtactcatgtacataaaataaataa 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 cctcttgtgtgtctgaaggcaagacaactactcatgtactcatgtacataaaataaataa 745

                                                                       
Query: 546 ataaatctttaaaaaaaagacttaaaacttctccagcaccatgtctacctgcatgctgcc 605
           ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 746 ataaatctttaaaaaaa-gacttaaaacttctccagcaccatgtctgcctgcatgctgcc 804

                                                                       
Query: 606 atgcttctcaccgtgatgataatggactgaacctctgaaactgtaaggcagccccagtta 665
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 805 atgcttctcaccgtgatgataatggactgaacctctgaaactgtaaggcagccccattta 864

                            
Query: 666 aatgttttcctttataa 682
           |||||||||||||||||
Sbjct: 865 aatgttttcctttataa 881


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space:   723876
Effective search space used:   723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)