Query= MSMg01no455_a04.b1 MSMg01no455_a04.b1 CHROMAT_FILE:
MSMg01no455_a04.b1 PHD_FILE: MSMg01no455_a04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:23 2005
(682 letters)
>mm_chr16_68776017_68777097
Length = 1081
Score = 1183 bits (612), Expect = 0.0
Identities = 663/680 (97%), Gaps = 3/680 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagccattg-caaaattacttttcttacataaaatgtgatacttttatatttat 62
||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 753 ggaattcagccattgac-aaattactattcttacataaaatgtgatacttttatatttat 695
Query: 63 tactaatcattttaattatactttctgattacatatgcaaatgataaacagggttcaagt 122
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 694 tactaatcattttaattatactttctgattacatacacaaatgataaacagggttcattt 635
Query: 123 ttaaaattggaatatacaggtgaatagatgacttttcttgtaaatataactggagtgtat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ttaaaattggaatatacaggtgaatagatgacttttcttgtaaatataactggagtgtat 575
Query: 183 aggaaaaactgtgtttctcatgtttatatgaagataagttttccattacaaaagaatgtt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aggaaaaactgtgtttctcatgtttatatgaagataagttttccattacaaaagaatgtt 515
Query: 243 ccattaatgttatataattattatggattaagtccaagaggacatcatatttccctgatt 302
||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ccattaacgttata-aattataatggattaagtccaagaggacatcatatttccctgatt 456
Query: 303 gactttccacaaagtttatttcaatcattatgcttaaatttaaattatattgttttatat 362
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gactttcctcaaagtttatttcaatcattatgcttaaatttaaattatattgttttataa 396
Query: 363 ctgtatataaatgttcagcctataaattgaatataagtatgtaacaaatttaaatagctt 422
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 395 ctgtatataaatgttcagcctataagttgaatataagtatgtaacaaatttaaatagctt 336
Query: 423 gaaacccttcttccaacatacaatgtagaatcattttgaataaagaggcattatagtgat 482
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 335 gaaacccttcttccaacatacaatgtagaatcatttttaataaagaggcattatagtgat 276
Query: 483 tttacctgatgtgtttaaaatgagtgctttaatgtttaatgtgctaaaactattttaaat 542
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 275 tttacctgatgtgtttaaaatgagtgctttaatgtttaacatgctaaaactattttaaat 216
Query: 543 aaaaaacaaagacattcatatatactatcatgtcatctgcaaaaagtgatattttgactt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aaaaaacaaagacattcatatatactatcatgtcatctgcaaaaagtgatattttgactt 156
Query: 603 cttcctttccaatttgtatccccttgatctcctattgttgtctaattgctctggctagga 662
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 155 cttcctttccaatttgtatccccttgatctcctgttgttgtctaattgctctggctagga 96
Query: 663 cttcaatacaatgttgaata 682
||||||||||||||||||||
Sbjct: 95 cttcaatacaatgttgaata 76
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1081
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1071
Effective search space: 719712
Effective search space used: 719712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_a04.g1 MSMg01no455_a04.g1 CHROMAT_FILE:
MSMg01no455_a04.g1 PHD_FILE: MSMg01no455_a04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:24 2005
(621 letters)
>mm_chr16_68732265_68733285
Length = 1021
Score = 1162 bits (601), Expect = 0.0
Identities = 616/621 (99%)
Strand = Plus / Plus
Query: 1 tcaaatgaggaatgctgaatgactaagaagcacttgaataaatgttcaacatctttagtc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 tcaaatgaggaatgctgaatgactaagaagcacttgaagaaatgttcaacatctttagtc 260
Query: 61 atcagggaaataagaactgggtttttaaaaatactgttctacaatagagataacattggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcagggaaataagaactgggtttttaaaaatactgttctacaatagagataacattggt 320
Query: 121 atataatttaatgtgtttttaaaaattacagacatctgaggacctgaaagactggggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atataatttaatgtgtttttaaaaattacagacatctgaggacctgaaagactggggcag 380
Query: 181 agcacagtctaatgctatagacaatcttaattcaattttactctactttttagacacaaa 240
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 381 agcacagtctaatgctatagacaatcttaattcagttttactgtactttttagacacaaa 440
Query: 241 tgtaataaagaaagtaatggtccaaataaggttgtttgagataaaaaaaaatagggtcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtaataaagaaagtaatggtccaaataaggttgtttgagataaaaaaaaatagggtcat 500
Query: 301 aaacatcagtaagtaaatactaatattaacagagcagccttttaccagaacttttgtgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaacatcagtaagtaaatactaatattaacagagcagccttttaccagaacttttgtgga 560
Query: 361 tagagcaatggaaacacaattgcctggcatttgccatagattatatatggggaatcatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagagcaatggaaacacaattgcctggcatttgccatagattatatatggggaatcatga 620
Query: 421 aagcaaggcagaaggcaatatccagaacctggatacactgtcgagattagtttctataga 480
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 621 aagcaaggcagaaggcaatatccagaacctggatacactgtcgagattactttctataga 680
Query: 481 taagttctgacactcaacaagaataaaggttttatacaaatgaatgtaaatgcttgttac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taagttctgacactcaacaagaataaaggttttatacaaatgaatgtaaatgcttgttac 740
Query: 541 aagaatcacaaaattacatccaagtgcaatccagggaaccgaatgcacttgaggtaaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagaatcacaaaattacatccaagtgcaatccagggaaccgaatgcacttgaggtaaaag 800
Query: 601 gtcctgtgccttttttcctgg 621
||| |||||||||||||||||
Sbjct: 801 gtcttgtgccttttttcctgg 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
