Query= MSMg01no455_j12.b1 MSMg01no455_j12.b1 CHROMAT_FILE:
MSMg01no455_j12.b1 PHD_FILE: MSMg01no455_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:09 2005
(567 letters)
>mm_chr16_67610815_67611781
Length = 967
Score = 1065 bits (551), Expect = 0.0
Identities = 560/563 (99%)
Strand = Plus / Minus
Query: 5 gaattctcttattgttatacttctggctttgcttagtttatttcctcacaaattgtgtaa 64
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gaattctctcattgttatacttctggctttgcttagtttatttcctcacaaattgtgtaa 708
Query: 65 atcatcaattgcagggcttttctatgaagccctcactcccttttccacgcagtctcctgt 124
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 707 atcatcaattgcagggcttttctatcaagccctcactcccttttccacgcagtctcctgt 648
Query: 125 acacaaacgttccattctgtgttcaacttcagaattcaaggagcgacgtttctatagctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 acacaaacgttccattctgtgttcaacttcagaattcaaggagcgacgtttctatagctt 588
Query: 185 tctctgagagggtctaattagcatccgagtctccctttactcatgtgcagctttctttag 244
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 587 tctctgagagggtctaattagcatctgagtctccctttactcatgtgcagctttctttag 528
Query: 245 aaaatacattagttctatgaggcttccctgaggattcataatactctagtttgttacatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aaaatacattagttctatgaggcttccctgaggattcataatactctagtttgttacatg 468
Query: 305 tactctgatattcagtgtgccttaattatgcacgtggcctcatttcaaagccttctcagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tactctgatattcagtgtgccttaattatgcacgtggcctcatttcaaagccttctcagg 408
Query: 365 gatcatatgggatagaacaggggtctagctgtaagttcactgtcacttattaatgtgtag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gatcatatgggatagaacaggggtctagctgtaagttcactgtcacttattaatgtgtag 348
Query: 425 gtggtattcagaggaggatgtttctggaggcaattatatatctatggagccaatatagca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gtggtattcagaggaggatgtttctggaggcaattatatatctatggagccaatatagca 288
Query: 485 agcagttacattctgcgtttggtagtgcctctgccaaggcagaattaaattcactattgt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 agcagttacattctgcgtttggtagtgcctctgccaaggcagaattaaattcactattgt 228
Query: 545 ggtacatagtatagtatctgttg 567
|||||||||||||||||||||||
Sbjct: 227 ggtacatagtatagtatctgttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_j12.g1 MSMg01no455_j12.g1 CHROMAT_FILE:
MSMg01no455_j12.g1 PHD_FILE: MSMg01no455_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:09 2005
(624 letters)
>mm_chr16_67482676_67483699
Length = 1024
Score = 1100 bits (569), Expect = 0.0
Identities = 611/625 (97%), Gaps = 2/625 (0%)
Strand = Plus / Plus
Query: 1 tttcgcagtgtgagtgcttagaaaaccaaaagtacagcattgctattagcgctgactttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcgcagtgtgagtgcttagaaaaccaaaagtacagcattgctattagcgctgactttg 260
Query: 61 taacaagaaaagcctgaggaagtcagaaaacagagcagctctgcagaccagtggtggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taacaagaaaagcctgaggaagtcagaaaacagagcagctctgcagaccagtggtggaaa 320
Query: 121 gaatgacgcctttcacatcatgcagtacatttcaaaactgaaaactgacaatcggtgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 gaatgacgcctttcacatcatgcagtacatttcaaaactgaaaactgacaatcggcgaga 380
Query: 181 gtggagaacagcaggccggataataattggggacttcattgaatgctaatgactaattca 240
|||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 381 gtggagaacagcaggctggataataattggagacttcattgaatgctaatgactaagcca 440
Query: 241 gtgcaacagcaaaagtatttaaggaaggcagaaacccgatcaatcattataggtttattt 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 gtgcaacagcaaaagtatttaaggaaggcagaaacccgatcgatcattataggtttattt 500
Query: 301 ttaacaggctagttcttttcataggctcttaaattgaattctaacatccttctctctttc 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 501 ttaacaggctagttcttttcatatgctcttaaattgaattctaacatccttctctgtttc 560
Query: 361 tccagaacacatgctgtggcactgtgtgtcagtgaagcacatacacctataagagttcct 420
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 tccggaacacatgctgtgacactgtgtgtcagtgaagcacatacacctataagagtttct 620
Query: 421 gtttaaatacctttatttttcttccttaatcgtttacttaggaattggaggatcaaagaa 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 gtttaaatacctttatttttcttccttaatcgtttacttaggaattggagaatcaaagaa 680
Query: 481 gaaatacaaaatgaagggaaaaacctgaaatttctcagaagtatttctcctcctggatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaaatacaaaatgaagggaaaaacctgaaatttctcagaagtatttctcctcctggatat 740
Query: 541 gaataccaaacaacaaccactatgacaacggtgacgactactactaacgctancaacaaa 600
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 741 gaataccaaacaacaaccactatgacaacggtgacgactactactaacgcta-caacaaa 799
Query: 601 aaaaa-gttagattttgactttttt 624
||||| |||||||||||||||||||
Sbjct: 800 aaaaaagttagattttgactttttt 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
