Query= MSMg01no455_k01.b1 MSMg01no455_k01.b1 CHROMAT_FILE:
MSMg01no455_k01.b1 PHD_FILE: MSMg01no455_k01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:11 2005
(135 letters)
>mm_chr16_6072825_6073359
Length = 535
Score = 261 bits (135), Expect = 1e-74
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 1 aatcatataagcacatgccaacacatgtgcttttctccttgtatagttctgaggatcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatcatataagcacatgccaacacatgtgcttttctccttgtatagttctgaggatcaaa 260
Query: 61 ttgggtcttgctgtttgtaagactgtccctttgcctatccttcctcctcattcctagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgggtcttgctgtttgtaagactgtccctttgcctatccttcctcctcattcctagcct 320
Query: 121 gtttttgtgcctgtg 135
|||||||||||||||
Sbjct: 321 gtttttgtgcctgtg 335
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 135
Length of database: 535
Length adjustment: 8
Effective length of query: 127
Effective length of database: 527
Effective search space: 66929
Effective search space used: 66929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no455_k01.g1 MSMg01no455_k01.g1 CHROMAT_FILE:
MSMg01no455_k01.g1 PHD_FILE: MSMg01no455_k01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:11 2005
(588 letters)
>mm_chr16_6236852_6237839
Length = 988
Score = 1129 bits (584), Expect = 0.0
Identities = 587/588 (99%)
Strand = Plus / Minus
Query: 1 ttaaaagtgacagatccaggactcaccagtaacttaaccaggataggagagggaaaggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ttaaaagtgacagatccaggactcaccagtaacttaaccaggataggagagggaaaggcc 646
Query: 61 ttgttagggaatatggaagaattcaagggcaggcttcagggccaggctgtgaggcctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ttgttagggaatatggaagaattcaagggcaggcttcagggccaggctgtgaggcctctg 586
Query: 121 acaatgtcttagaccccagggatcatgtcttctgctcatgcttggaattttgctatgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 acaatgtcttagaccccagggatcatgtcttctgctcatgcttggaattttgctatgtct 526
Query: 181 gctggagcaggccacggctcactcacttcctgggatgtggactttgctgtctgctctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gctggagcaggccacggctcactcacttcctgggatgtggactttgctgtctgctctgct 466
Query: 241 ctccagtctccagggactaatgtggcaatgatgaatatacttgggagaaacaaaatattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctccagtctccagggactaatgtggcaatgatgaatatacttgggagaaacaaaatattt 406
Query: 301 cattttctttcacaaagcaaaaatcgtaccttccatgaggataggacagccacagccaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cattttctttcacaaagcaaaaatcgtaccttccatgaggataggacagccacagccaag 346
Query: 361 agagctggaacaactgacttgaagtaacctcaagcttgaggagaggaaagatctactgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 agagctggaacaactgacttgaagtaacctcaagcttgaggagaggaaagatctactgaa 286
Query: 421 atggaatccactgtttatttcacagctcctcagcacctctcctttctgctccaagggtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atggaatccactgtttatttcacagctcctcagcacctctcctttctgctccaagggtga 226
Query: 481 gcaaaaccagcatttccaaatctgtctctcttctccacttcctcccttccctcctctgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gcaaaaccagcatttccaaatctgtctctcttctccacttcctcccttccctcctctgcc 166
Query: 541 tctctcctcccttttttctgccttccccttcctcctgcctctgaactt 588
||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 165 tctctcctcccttttttctgccttccccttcctcctgcctctgtactt 118
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
