Query= MSMg01no456_i11.b1 MSMg01no456_i11.b1 CHROMAT_FILE:
MSMg01no456_i11.b1 PHD_FILE: MSMg01no456_i11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:22 2005
(177 letters)
>mm_chr16_77308759_77309331
Length = 573
Score = 304 bits (157), Expect = 2e-87
Identities = 171/177 (96%), Gaps = 4/177 (2%)
Strand = Plus / Plus
Query: 1 ttccttccgaatggtcatggggagggtatgaaaataggaagggaataaaagaaagggttt 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccttccgaatggtcatagggagggtatgaaaataggaagggaataaaagaaagggttt 260
Query: 61 ggaactcctatgaggtttgagtggcaaatctcaggaaccaccatcatgtgtagaaaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaactcctatgaggtttgagtggcaaatctcaggaaccaccatcatgtgtagaaaagtg 320
Query: 121 caaaaactcagaagcacagatcttctctcttggctggatggctgctaaatattatag 177
||||||||||||||||||||||| |||||||| |||||| |||||||||||||||
Sbjct: 321 caaaaactcagaagcacagatct---ctcttggc-ggatggttgctaaatattatag 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 573
Length adjustment: 8
Effective length of query: 169
Effective length of database: 565
Effective search space: 95485
Effective search space used: 95485
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no456_i11.g1 MSMg01no456_i11.g1 CHROMAT_FILE:
MSMg01no456_i11.g1 PHD_FILE: MSMg01no456_i11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:23 2005
(191 letters)
>mm_chr16_77481607_77482197
Length = 591
Score = 329 bits (170), Expect = 7e-95
Identities = 185/190 (97%)
Strand = Plus / Minus
Query: 1 aggaccatctcagctcactaaccatctcatttagcttaacaagggagagccaagtacagt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 390 aggaccatctcagctcactaaccatctcatttagcttaacaagggagatccaagtacagt 331
Query: 61 gagaaccacttatgtcgaaaacaaaacaaaacaaaaacaaaaaacaatggaaggtgaatg 120
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gagaaccacttatgtcaaaaaaaaaacaaaacaaaaacaaaaaacaatggaaggtgaatg 271
Query: 121 agaggatatttaacgtcaaaccctgggctccacaggcatacctgtgtatgagcattcaca 180
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 agaggataactaacgtcaaaccctgggctccacaggcatacctgtgtatgagcattcaca 211
Query: 181 catgcgtgcg 190
||||||||||
Sbjct: 210 catgcgtgcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 591
Length adjustment: 8
Effective length of query: 183
Effective length of database: 583
Effective search space: 106689
Effective search space used: 106689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
