Query= MSMg01no456_k03.b1 MSMg01no456_k03.b1 CHROMAT_FILE:
MSMg01no456_k03.b1 PHD_FILE: MSMg01no456_k03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:31 2005
(329 letters)
>mm_chr16_13880517_13881245
Length = 729
Score = 592 bits (306), Expect = e-173
Identities = 327/342 (95%), Gaps = 13/342 (3%)
Strand = Plus / Plus
Query: 1 tgagcctatgaactgggttatctcctaggagcaatatttggctctaccaaaatcacaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagcctatgaactgggttatctcctaggagcaatatttggctctaccaaaatcacaaat 260
Query: 61 gcatacatgcattatctggcccaacatcctgcctctatgacttatacacaaacacacttg 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 gcatacatgcattatctggcccaacatcctgcctctatgacttctacacaaacacacttg 320
Query: 121 ccaagtgagaaatgacatatgtttaaagttattggctgcagcaatatttgtatcagtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaagtgagaaatgacatatgtttaaagttattggctgcagcaatatttgtatcagtaaa 380
Query: 181 acagaaacacaaaataaactctattcataaaattctattcatcattcaaagtaaaataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagaaacacaaaataaactctattcataaaattctattcatcattcaaagtaaaataaa 440
Query: 241 gtcgctgttaacaaagagaaagttctctgtgtgacatgcagtgaagtccaagacgcaagg 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttgctgttaacaaagagaaagttctctgtgtgacatgcagtgaagtccaagacgcaagg 500
Query: 301 gaagaaagcc-------------ttaagtgctggaggggtgg 329
|||||||||| |||||||||||||||||||
Sbjct: 501 gaagaaagccagggggtacggtattaagtgctggaggggtgg 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_k03.g1 MSMg01no456_k03.g1 CHROMAT_FILE:
MSMg01no456_k03.g1 PHD_FILE: MSMg01no456_k03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:31 2005
(239 letters)
>mm_chr16_13959647_13960285
Length = 639
Score = 460 bits (238), Expect = e-134
Identities = 238/238 (100%)
Strand = Plus / Minus
Query: 1 tttagtcagaactattctccactattcatcatttagatacccctgacagctctggggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tttagtcagaactattctccactattcatcatttagatacccctgacagctctggggaaa 379
Query: 61 taagataatcaacaaaaagaaaaggcactgacaatctagaagtcagtcaactctcagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 taagataatcaacaaaaagaaaaggcactgacaatctagaagtcagtcaactctcagctt 319
Query: 121 tgagattttaaatgattttgggaattcattaactgaagaaaatgacatgcaaacagagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tgagattttaaatgattttgggaattcattaactgaagaaaatgacatgcaaacagagca 259
Query: 181 ggcatacatcagggacagggctcaattacactgaattgctagtaagccttaggactga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ggcatacatcagggacagggctcaattacactgaattgctagtaagccttaggactga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
