Query= MSMg01no457_p23.b1 MSMg01no457_p23.b1 CHROMAT_FILE:
MSMg01no457_p23.b1 PHD_FILE: MSMg01no457_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:27 2005
(418 letters)
>mm_chr16_43591572_43592388
Length = 817
Score = 779 bits (403), Expect = 0.0
Identities = 412/415 (99%), Gaps = 1/415 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttccttttcacgccagaaaatatttctgccctacaatcctgctaactcctca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggaattctttccttttcacgccagaaaatatttctgccctacaatcctgctaactcctca 558
Query: 64 aagtggagacagagctactattaagagtagaaggggacttgccttcaaatgtcatacttg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aagtggagacagagctactattaagagtagaaggggacttgccttcaaatgtcatacttg 498
Query: 124 gctaattagctaatctttctcaaaagtaaacttcactgggataattttttcactagtgta 183
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 497 gctaattagctaatctttctcaaaagtaaacttcgctgggataattttttcactagtgta 438
Query: 184 catctctgcttaattattattctttggcatgtcattttggtatataaattatcaacatga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 catctctgcttaattattattctttggcatgtcattttggtatataaattatcaacatga 378
Query: 244 tcctgtgccataactggtaatttatacagataatatcagggaaagaggaagctctctgag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tcctgtgccataactggtaatttatacagataatatcagggaaagaggaagctctctgag 318
Query: 304 ctattcactgcttttcagagatagatggtcttgcctttgctggctttgcttaccaggctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 317 ctattcactgcttttcagagatagatggtcttgcctttgctggctttgcttaccagggtt 258
Query: 364 ttttgcttgtaaaagaccacccactcctgctgccaggacagcaatctatggctct 418
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttt-gcttgtaaaagaccacccactcctgctgccaggacagcaatctatggctct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 817
Length adjustment: 9
Effective length of query: 409
Effective length of database: 808
Effective search space: 330472
Effective search space used: 330472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_p23.g1 MSMg01no457_p23.g1 CHROMAT_FILE:
MSMg01no457_p23.g1 PHD_FILE: MSMg01no457_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:27 2005
(344 letters)
>mm_chr16_43419552_43420295
Length = 744
Score = 650 bits (336), Expect = 0.0
Identities = 342/344 (99%)
Strand = Plus / Plus
Query: 1 cttaagaagtttgatagtgtttcttagaacctagtaggtcctcaaacagttagcaaaacg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 cttaagaagtttgatagtgtttcttagaacctagtaggtcctcaaacagttagcaaaatg 260
Query: 61 gatgctgttttgttatgaacatgaatgctgcttcagacattcctgtatcactgacagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatgctgttttgttatgaacatgaatgctgcttcagacattcctgtatcactgacagaat 320
Query: 121 gatggtctgataaataaaaaggccttgctctattcaaaattagaagcatgatcagtgttt 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatggtctaataaataaaaaggccttgctctattcaaaattagaagcatgatcagtgttt 380
Query: 181 ttttaaatcttgggactctatgaaccgtctttatttcaagtaaatatcttttactgcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttaaatcttgggactctatgaaccgtctttatttcaagtaaatatcttttactgcaaa 440
Query: 241 ctctctttctctttaagaattattttaggcatatttttcaaaggatagctcataaattat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctctttctctttaagaattattttaggcatatttttcaaaggatagctcataaattat 500
Query: 301 taccttttaaagaaagaataaatttacaaacttaaagaaaataa 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taccttttaaagaaagaataaatttacaaacttaaagaaaataa 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
