Query= MSMg01no458_j09.b1 MSMg01no458_j09.b1 CHROMAT_FILE:
MSMg01no458_j09.b1 PHD_FILE: MSMg01no458_j09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:14 2005
(554 letters)
>mm_chr16_72884038_72884990
Length = 953
Score = 824 bits (426), Expect = 0.0
Identities = 502/540 (92%), Gaps = 23/540 (4%)
Strand = Plus / Minus
Query: 16 aaaaaaataattggtcattggattttaatatgagtttaaaaacctcaagcaaggccatgg 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 aaaaaaataattggtcattggattttaatatgagtttaaaaacctcaagcaaggccatgg 894
Query: 76 atatttaggtctgtctgactgtatattttcacatgtgtccaggagtgtgggtacatgcgt 135
|||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 893 atatttaggtctgtctgactgtatattttcacatgtgtccag--------------gc-- 850
Query: 136 attcagtgtgggtacatgcgtattctagggatggggactgaggacaaacacaagcatcct 195
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 -----gtgtgggtacatgcgtattctagggatggggactgaggacaaacacaagcatcct 795
Query: 196 caggaagccctacacctttatttatttaatttttttt-aaagatggcgttccaactcact 254
|||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 794 caggaagctctatacctttatttatttaattttttttaaaagatggcgttccaactcact 735
Query: 255 gttctgtaatctgacctcacagatttggttaggaagcctggcccaggaactccagagaga 314
| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 734 ggcctgtactctgacctcacaggtttggttaggaagcctggcccaggaactccagagaga 675
Query: 315 agtgatttacccaatgaaatatgacctcagcacaaagtaatcacaacactggcaatgaaa 374
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 agtgacttacccaatgaaatatgacctcagcacaaagtaatcacaacactggcaatgaaa 615
Query: 375 agtgctcctcatgtcacagatgtggttctttgcatactaatttggatgagagtggattac 434
|||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 614 agtgctcctcatgtcacagatgtggtcctatgcatactaatttgtatgagagtggattac 555
Query: 435 atctggagagaacctttttttaagaacaaagaagatagagtctcatcacccggatgaaga 494
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 554 atctgaagagaacctttttt-aagaacaaagaagatagagtctcatcccccggatgaaga 496
Query: 495 ccgaagttctaccacttacagtgaacacgattttggtcaggttgcttagtctgcttctgt 554
|| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cctcagtgctaccacttacagtgaacacgattttggtcaggttgcttagtctgcttctgt 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 953
Length adjustment: 10
Effective length of query: 544
Effective length of database: 943
Effective search space: 512992
Effective search space used: 512992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_j09.g1 MSMg01no458_j09.g1 CHROMAT_FILE:
MSMg01no458_j09.g1 PHD_FILE: MSMg01no458_j09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:14 2005
(394 letters)
>mm_chr16_72766736_72767528
Length = 793
Score = 646 bits (334), Expect = 0.0
Identities = 379/394 (96%), Gaps = 1/394 (0%)
Strand = Plus / Plus
Query: 1 aaggctagggaactgtgtgtcccttggtggaaatgtgttcttgagacttgatctgaatgt 60
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 201 aaggctagggaactgtgtgtccctcggtggaactgtgttcttgagacttgatctgaatgt 260
Query: 61 acgccaaatagtccataaagaaagatactgcatagctctggatttcctaacactggggtt 120
|| ||||| ||||||||||||| || |||||||||| ||||||||||| || |||||||
Sbjct: 261 acaccaaagcgtccataaagaaa-atgctgcatagctttggatttcctatcattggggtt 319
Query: 121 tctacatgttctccttagccacgccttctttatctttatcctggctaaggggtgatattg 180
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 320 tctacatgttattcttagccacgccttctttatctttatcctggctaaggggtgatgttg 379
Query: 181 aaaaggcaaatgttctaaaattattcacttcttgatgaaaaccaaaatgagtttagtact 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 380 aaaaggcaaatgttctaaaattattcacttcttgatgaaaaccaaaataagtttagtact 439
Query: 241 tccaactaattattttggtatttagtagagtgtctcaggcaaaatgtataacacatatgg 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tccaactaattattttggtttttagtagagtgtctcaggcaaaatgtataacacatatgg 499
Query: 301 ataattagctttagttctttccaacaatttaagaaatagattattgtctagacatgttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ataattagctttagttctttccaacaatttaagaaatagattattgtctagacatgttgt 559
Query: 361 tcttagtaatgcaaatagctattcttctttgaat 394
||||||||||||||||||||||||||||||||||
Sbjct: 560 tcttagtaatgcaaatagctattcttctttgaat 593
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 793
Length adjustment: 9
Effective length of query: 385
Effective length of database: 784
Effective search space: 301840
Effective search space used: 301840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
