Query= MSMg01no458_p24.b1 MSMg01no458_p24.b1 CHROMAT_FILE:
MSMg01no458_p24.b1 PHD_FILE: MSMg01no458_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:44 2005
(511 letters)
>mm_chr16_31102034_31102945
Length = 912
Score = 864 bits (447), Expect = 0.0
Identities = 492/507 (97%), Gaps = 1/507 (0%)
Strand = Plus / Plus
Query: 6 gaattcctagctgtttc-ccaacctgctgaaattattgcttctacagtggggaagcgata 64
||||||||||||| | | ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 206 gaattcctagctgctacaacaacctgctgaaattatcgcttctacagtggggaagcgata 265
Query: 65 gcctgctacagttcattagcataccccgagtgagatagttctcaaaacataagcaatttg 124
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gcctaccacagttcattagcataccccgagtgagatagttctcaaaacataagcaatttc 325
Query: 125 ttccatctaaataatggaatatattttgatatgtaagcgctgtattaagtgactaagggt 184
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 326 ttccatctaaataatggaatatattttgatatgtaagcgctgtagtaagtgacaaagggt 385
Query: 185 taccaaaattttcccagggttatactggtcatacattctttgggagttactaaccctcaa 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 386 taccaaaattttcccagggttatactggtcatacattctttgggagttattaaccctcaa 445
Query: 245 aatggaagacaggcaacattggattaaaaaaacaagtatttcctctttttctgaaaacaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aatggaagacaggcaacattggattaaaaaaacaagtatttcctctttttctgaaaacaa 505
Query: 305 aactacccaacacggaaggtattctctgtagtacctacctgtccctctaggccaccccac 364
|||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 506 aactacacaacacggaagatattctctgtagtgcctacctgtccctctaggccaccacac 565
Query: 365 tgcctgcagccttgccagagccctcacgctttctgtgtctgctgctgacatccccttccc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tgcctgcagccttgccagagccctcacgctttctgtgtctgctgctgacatccccttccc 625
Query: 425 ctcccctgttagccatgtgaactaaggatgggtctgaagtattcctttgctatgtggatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ctcccctgttagccatgtgaactaaggatgggtctgaagtattcctttgctatgtggatg 685
Query: 485 ctctgaaagggctcttgactacttggc 511
|||||||||||||||||||||||||||
Sbjct: 686 ctctgaaagggctcttgactacttggc 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 912
Length adjustment: 10
Effective length of query: 501
Effective length of database: 902
Effective search space: 451902
Effective search space used: 451902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_p24.g1 MSMg01no458_p24.g1 CHROMAT_FILE:
MSMg01no458_p24.g1 PHD_FILE: MSMg01no458_p24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:44 2005
(525 letters)
>mm_chr16_31269764_31270688
Length = 925
Score = 574 bits (297), Expect = e-168
Identities = 306/311 (98%), Gaps = 4/311 (1%)
Strand = Plus / Minus
Query: 219 tgagaaaccaaaaaaaaaaagataaaaattgctcttgagaggggcagtggcccccacata 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 tgagaaaccaaaaaaaaaaagataaaaattgctcttgagaggggcagtggcccccacata 866
Query: 279 tactttcagcacttgggaggtagggagatatgagtgagaattcagggtcatccttagctg 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tactttcagcacttgggaggtagggagatatgagtgagaattcagggtcatccttagctg 806
Query: 339 catagccagttaaaggccaggctaggctaggtctctctgtctgtctctctgtctctgtct 398
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 805 catagccagttaaaggccaggctaggctaggtctctctgtctgtctctctatctctgtct 746
Query: 399 gactgtctctctctctc----acacacacacacacatacacccgaaggtgcttgaattcc 454
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gactgtctctctctctctctcacacacacacacacatacacccgaaggtgcttgaattcc 686
Query: 455 actgatataatttaagatataattatgctctactataacattgtctttctgtctactcaa 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 actgatataatttaagatataattatgctctactataacattgtctttctgtctactcaa 626
Query: 515 gaatatggagt 525
|||||||||||
Sbjct: 625 gaatatggagt 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
