Query= MSMg01no460_m11.b1 MSMg01no460_m11.b1 CHROMAT_FILE:
MSMg01no460_m11.b1 PHD_FILE: MSMg01no460_m11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:08 2005
(302 letters)
>mm_chr16_95645266_95645967
Length = 702
Score = 513 bits (265), Expect = e-150
Identities = 292/307 (95%), Gaps = 12/307 (3%)
Strand = Plus / Minus
Query: 1 gctagaatttgcacacaggcaatagggtcacagccacactggaagacatggagatagctc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 300 gctagaatttgcacacaggcaatagagtcacagccacactggaagacatggagatagctc 241
Query: 61 tagggcacaagctagcttatttctgcaattaaaaacaactgtgtgtatgatgtagtatat 120
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 240 tagggcacaagctagcttatttttgcaattaaaaacaactgtgtgtatgatgtagtgtat 181
Query: 121 gtgcacatatgcattcatgtgtgtgcacatgcctgtttgtgggatgcctccctgtgcatg 180
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gtgcacatatgcattc--gtgtgtgcacatgcctgtttgtgggatgcctccctgtgcatg 123
Query: 181 cgtgtgtgatgtccacagatcagcattggtatcttcttcaactcttttccacagcttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cgtgtgtgatgtccacagatcagcattggtatcttcttcaactcttttccacagcttttg 63
Query: 241 a-----ttatttgcactccagtaaaccaaaggcattgtttcagccagaccggctggctgg 295
| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agacagt-----gcactccagtaaaccaaaggcattgtttcagccagaccggctggctgg 8
Query: 296 cgagtcc 302
|||||||
Sbjct: 7 cgagtcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_m11.g1 MSMg01no460_m11.g1 CHROMAT_FILE:
MSMg01no460_m11.g1 PHD_FILE: MSMg01no460_m11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:08 2005
(501 letters)
>mm_chr16_95446451_95447351
Length = 901
Score = 199 bits (103), Expect = 3e-55
Identities = 109/111 (98%)
Strand = Plus / Plus
Query: 391 aacacatgtctacaaattcctttgctgaatttgaaatagcacgcttaaaatactcactat 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aacacatgtctacaaattcctttgctgaatttgaaatagcacgcttaaaatactcactat 650
Query: 451 ggctggaaacaatgtcctctctccccatcgtacacacgcagaacagcgtct 501
|||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 651 ggctggaaacaatgtcctctctccccatcgtacatacgcagaacagtgtct 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
