TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGACAATCCGCGGAA
TTCTTTAAATTTTCCCCTTTTTCATTTCTCATATTTAGTCACTAAACAGA
TGACTTTACCCTCCAAGTGAATGCCACCTTACTGTTTTGCACATGTTAAT
ATGGGCTTTGACAACACAGACCTGTAATTGCAACATGATTAAAACAAATC
TGTTTGATCTGGGTGTGGTGGCTAGTACCTATAATTCCAGCATTCTCTAC
TCAGGATGCTAAAACTAAGTGGTGAGTTTTAGGCTTGTCTGATTTGTGGT
GGGAAAGTCTGTCATATTATTCACACATAGACAGACAGACAGACAGACAC
ACACAAGTTCTTCATGACTCCAGAAATTAGTCAAAATTGCCATATACTCA
TGGGCACAAATGCACAGCACATGCATGTAAACAAACATAAAATATTCTCT
TCTAGCACACATGTCTCAGTTTAGAAGTCTCTTTCTAAAGTAGTCAGCAG
TTCTTGCCATTGCTGCTGACAGTCTTCTAGACACTCCAGACTTCTCAGAG
AGAAGGACACATACTTGCAAATTTAGTGCAAAATTAGCTAGNCCTTCTTC
CTCCTTTGCTTCAGTGCCTAAGGGCTGCATCACTCTGAACTTGCTCCTAC
CTGGGGTGGGTTATCACTTAATTCAATCCCCCCATATGTGTTTTAGAGCT
CAATTGATGAGTTACCTTGGTTCCAAACTCTCCGGGTTTTATTATCACAG

ATGCAGTGGGAGGCCTGGNGGNCGCCTGGGTTCCGAATTTAGGTGAACTA
TAGAAGTATCCCCGGAATTCACTCTTGCACCTGCGTACAGGACTTGTTTA
CTAGTTAGGCACAGCGGAGGCCCGCGCCATCTTATAATGGCGATTGCTCG
CGGCACACACGGCTCTCCTCAGAGATTACTGGCGGCACACATGCGATTGC
TCGCAGCACGTACCGGCTTTCCACATCCGGAGATTACCAGATGGCAAAAG
ACAGATGTAAGAATCTTACTAACAGAAACCAAGTGAACTAACCATCATCA
GAATCCAGCACTCTTATCTAAGCCAGTGTTCGGCACTTCAACACACCCCG
AAAACCTAGACCCTGATTTAAAGGCATATCTCATGATGATGGTAGAATAC
ATCAAGAAGGACTTTAAAAACTCAAAGAAATACAGGAGAACACTGCTAAA
GAGTTGCAAGTCCTTAAAGAAAAACAGGAAAACCAGTCCAAACAGGTGTT
GGAAATGAACAAAACCATACTAGACCTAAAAAGGGAAGTAGACACAATAA
AGAATACCCAAAGTGAGGCAACGCTGGAGATAGAAACCCTAGGAAAGAAA
TCTGGAACCATAGTTGCGAGCATCAGCAACAGAATACTAGATATGTATTA
GAGAATCCCAGGTGGCATAAGATTCCCTAATAGAACATCGGCACCATCAA
TCAAAGAAAATGCCTAAAGTTTCCTAATTCCACATATCCTTGGAAAN

Query= MSMg01no461_b14.b1 MSMg01no461_b14.b1 CHROMAT_FILE:
MSMg01no461_b14.b1 PHD_FILE: MSMg01no461_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:34 2005
         (476 letters)



>mm_chr16_64317323_64318198
          Length = 876

 Score =  787 bits (407), Expect = 0.0
 Identities = 434/445 (97%), Gaps = 5/445 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   catttctcatatttagtcactaaacagatgactttaccctccaagtgaatgccaccttac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 catttctcatatttagtcactaaacagatgactttaccctccaagtgaatgccaccttac 385

                                                                       
Query: 61  tgttttgcacatgttaatatgggctttgacaacacagacctgtaattgcaacatgattaa 120
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttttttgcacatgttaatatgggctttgacaacacagacctgtaattgcaacatgattaa 325

                                                                       
Query: 121 aacaaatctgtttgatctgggtgtggtggctagtacctataattccagcattctctactc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aacaaatctgtttgatctgggtgtggtggctagtacctataattccagcattctctactc 265

                                                                       
Query: 181 aggatgctaaaactaagtggtgagttttaggcttgtctgatttgtggtgggaaagtctgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 264 aggatgctaaaactaagtggtgagttttaggcttgtctgatttgtggtgagaaagtctgt 205

                                                                       
Query: 241 catattattcacacatagacagacagacagacagacacacaca----agttcttcatgac 296
           ||||  |  ||||||||||||||||||||||||||||||||||    |||||||||||||
Sbjct: 204 catag-acacacacatagacagacagacagacagacacacacacacaagttcttcatgac 146

                                                                       
Query: 297 tccagaaattagtcaaaattgccatatactcatgggcacaaatgcacagcacatgcatgt 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tccagaaattagtcaaaattgccatatactcatgggcacaaatgcacagcacatgcatgt 86

                                                                       
Query: 357 aaacaaacataaaatattctcttctagcacacatgtctcagtttagaagtctctttctaa 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  aaacaaacataaaatattctcttctagcacacatgtctcagtttagaagtctctttctaa 26

                                    
Query: 417 agtagtcagcagttcttgccattgc 441
           ||||||||||||||||||| |||||
Sbjct: 25  agtagtcagcagttcttgctattgc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space:   403556
Effective search space used:   403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)