XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCCCAAACTTCCCAAGATGAGCCTAAGACCGAGGTTGCTCTACATAAAC
TGACAATGAAGCTGAATTGCCTAGGACAAGATCCATACAACTCACTGAAC
ATGAGGAGGTCAAGCTGGTGCCTGCATGGAATCTTCTCCTCTAAGTTCTA
GTCTCTTTGGTGCAGGAAAGTACTCTGCAGGCTACCAAAGGAGAAACATG
AACCCCAACCTAGCTGGAAAACCGTGACTTGCAATTTACCCTGCCTTAAC
AATAAGCTAGGGCAATGTTGGCACAGAACTTGTGGAAGTAGCCAACCAAT
GTTTTAATTGACTTAAAGTCCATTCCACATGAAGGAACCCACAACTGACA
GTGTTTAAGTAGCCAGGAACAAGAGACTAGATAGCCCAGAGACCTAGGGT
AAAACCAAACAATACTAGTGTTTGTTTTTAAAAAAAAATCAATACAAACG
AATAAAATTATTCCTAATGATACTGTGCTGCACTCACAGTACCTTATTCA
GTCATTATTACAGAGAATTCCTGTGGCAGCATATGGAACCAGTTCCAGAG
ACCCATAGCAAGAAATTATACACACACACACACACACACACACTTTTTTT
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCTTCAAAGACTCTATCAAA
CCTCTCCCCCTCAAATCATCCCCTCAAGGGCTCACAAAACCCTGTTAAAT
AAAN

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAGATCCCCAACACCCACATAAAAGCCAGGC
CTAGTTGTACATGTATAAAACCGCAGAACTATGAGGATTCAGAAATAAGC
ATGTGTTGAAGGATTGATAACCATCCAATCTAGCTGAAATGGCCTGCTTC
AGGTTCAGTGGGGAGATTCAGTCTCAAAAGTCTGAAGCACAGGTTAAAAA
TAGAAGAGAACATCTGACATAGACCTCTGGCTTGCACATGTGCACACAGC
CAAGAACACACACAGACTCAAATATACTCATATACAGATATGTAGCAAAC
ATACATATATGCATCACACACATACACACACACACTCCAGAGCTTCAGAA
CAGTAGGATAGCACAGTAACTATTTAGAGAACGCAGCCTAAAACAGAAAG
AATAATTTAGATGTCACACCATTCTAACTGCCACCTATAAAGGCCTGGCT
TACAATCTCATTAACAATATGTTGCAGGGGCACCCTTTCAGAGGCAAGGG
GGAGGAGTATGGAGAGAGAAATCCTATGAGGAGGGACCAAGAGGGGGCAG
CATTTGGGGTGTACATCATAAATAAATTTTTAAACAAACCTACCGCCTGT
GAACAATTTTAGACTGAAAAGTGGTTGATATCGGAGACCGACTATATGTA
GATAAACATAAAAACCCCTTTATTTGTTTGGAGCTCATCAAAATCCTC

Query= MSMg01no461_f14.g1 MSMg01no461_f14.g1 CHROMAT_FILE:
MSMg01no461_f14.g1 PHD_FILE: MSMg01no461_f14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:55 2005
         (508 letters)



>mm_chr16_52547470_52548377
          Length = 908

 Score =  605 bits (313), Expect = e-177
 Identities = 366/397 (92%), Gaps = 22/397 (5%)
 Strand = Plus / Minus

                                                                       
Query: 134 agtggggagattcagtctcaaaagtctgaagcacaggttaaaaatagaagagaacatctg 193
           ||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||
Sbjct: 908 agtggggagattcagtctccaaagtctgaagcacgggttaaaaatagaagaaaacatctg 849

                                                                       
Query: 194 acatagacctctggcttgcacatgtgcacacagccaagaacacacacagactcaaatata 253
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 848 acatagacctctggcttgcacatgtgcacacagccaagaacacacacagacacaaatata 789

                                                                       
Query: 254 ctcatatacagatatgtagcaaacatacatatatgcatcacacac--at----------- 300
           |||||||||||||||||||||||||||||||||||||||||||||  ||           
Sbjct: 788 ctcatatacagatatgtagcaaacatacatatatgcatcacacacaaatacacacacaca 729

                                                                       
Query: 301 ---------acacacacacactccagagcttcagaacagtaggatagcacagtaactatt 351
                    |||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 728 cacacacacacacacacacactccagagcttcataacagtaggatagcacagtaactctt 669

                                                                       
Query: 352 tagagaacgcagcctaaaacagaaagaataatttagatgtcacaccattctaactgccac 411
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tagagaaagcagcctaaaacagaaagaataatttagatgtcacaccattctaactgccac 609

                                                                       
Query: 412 ctataaaggcctggcttacaatctcattaacaatatgttgcaggggcaccctttcagagg 471
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 608 ctataaaggcctggcttacaatctcattaacagtatgttgcaggggcaccctttcagagg 549

                                                
Query: 472 caagggggaggagtatggagagagaaatcctatgagg 508
           |||||||||||||||||||| ||||||||||||||||
Sbjct: 548 caagggggaggagtatggagggagaaatcctatgagg 512


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space:   447204
Effective search space used:   447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)